6DJB
Structure of human Volume Regulated Anion Channel composed of SWELL1 (LRRC8A)
External Resource: Annotation
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF13855 | e6djbA2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: PF13855 | ECOD (1.6) |
A | PF12534 | e6djbA1 | A: alpha bundles | X: Connexin 26 (From Topology) | H: Connexin 26 (From Topology) | T: Connexin 26 | F: PF12534 | ECOD (1.6) |
B | PF13855 | e6djbB2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: PF13855 | ECOD (1.6) |
B | PF12534 | e6djbB1 | A: alpha bundles | X: Connexin 26 (From Topology) | H: Connexin 26 (From Topology) | T: Connexin 26 | F: PF12534 | ECOD (1.6) |
D [auth F] | PF13855 | e6djbF1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: PF13855 | ECOD (1.6) |
D [auth F] | PF12534 | e6djbF2 | A: alpha bundles | X: Connexin 26 (From Topology) | H: Connexin 26 (From Topology) | T: Connexin 26 | F: PF12534 | ECOD (1.6) |
C [auth E] | PF13855 | e6djbE1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: PF13855 | ECOD (1.6) |
C [auth E] | PF12534 | e6djbE2 | A: alpha bundles | X: Connexin 26 (From Topology) | H: Connexin 26 (From Topology) | T: Connexin 26 | F: PF12534 | ECOD (1.6) |
E [auth C] | PF13855 | e6djbC1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: PF13855 | ECOD (1.6) |
E [auth C] | PF12534 | e6djbC2 | A: alpha bundles | X: Connexin 26 (From Topology) | H: Connexin 26 (From Topology) | T: Connexin 26 | F: PF12534 | ECOD (1.6) |
F [auth D] | PF13855 | e6djbD2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: PF13855 | ECOD (1.6) |
F [auth D] | PF12534 | e6djbD1 | A: alpha bundles | X: Connexin 26 (From Topology) | H: Connexin 26 (From Topology) | T: Connexin 26 | F: PF12534 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13855 | Leucine rich repeat (LRR_8) | Leucine rich repeat | - | Repeat | |
PF12534 | Pannexin-like TM region of LRRC8 (Pannexin_like) | Pannexin-like TM region of LRRC8 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003591 | Leucine-rich repeat, typical subtype | Repeat | |
IPR001611 | Leucine-rich repeat | Repeat | |
IPR021040 | LRRC8, pannexin-like TM region | Domain | |
IPR032675 | Leucine-rich repeat domain superfamily | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Tetraspan junctional complexes | Pannexin |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Channels: Other Ion Channels | LRRC8A (SWELL1) volume-regulated anion channel |