The structure of HcRed7, a brighter and red-shifted HcRed variant
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | d6dejd_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | automated matches | Leathery sea anemone (Radianthus crispa ) [TaxId: 3122430 ], | SCOPe (2.08) |
| C | d6dejc_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | automated matches | Leathery sea anemone (Radianthus crispa ) [TaxId: 3122430 ], | SCOPe (2.08) |
| B | d6dejb_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | automated matches | Leathery sea anemone (Radianthus crispa ) [TaxId: 3122430 ], | SCOPe (2.08) |
| A | d6deja_ | Alpha and beta proteins (a+b) | GFP-like | GFP-like | Fluorescent proteins | automated matches | Leathery sea anemone (Radianthus crispa ) [TaxId: 3122430 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D | SCOP2B Superfamily | GFP-like | 8083510 | 3000576 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | GFP-like | 8083510 | 3000576 | SCOP2B (2022-06-29) |
| B | SCOP2 Family | Fluorescent proteins | 8083509 | 4001049 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | GFP-like | 8083510 | 3000576 | SCOP2 (2022-06-29) |
| A | SCOP2B Superfamily | GFP-like | 8083510 | 3000576 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | DEAD | e6dejD1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleotidyltransferase | F: DEAD | ECOD (v295.2) |
| C | DEAD | e6dejC1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleotidyltransferase | F: DEAD | ECOD (v295.2) |
| B | DEAD | e6dejB1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleotidyltransferase | F: DEAD | ECOD (v295.2) |
| A | SAM_1 | e6dejA1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleotidyltransferase | F: SAM_1 | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
| C | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
| B | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
| A | 2.40.155.10 | Mainly Beta | Beta Barrel | Green Fluorescent Protein | Green fluorescent protein | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| GFP-like non-fluorescent chromoprotein | - | - |