6B23 | pdb_00006b23

Capsid protein and C-terminal part of CpmB protein in the Staphylococcus aureus pathogenicity island 1 80alpha-derived procapsid

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
H [auth d]Hydrolasee6b23d1 A: alpha bundlesX: TIM beta/alpha-barrelH: TIM barrelsT: TIM barrelsF: HydrolaseECOD (develop294)
F [auth c]Hydrolasee6b23c1 A: alpha bundlesX: TIM beta/alpha-barrelH: TIM barrelsT: TIM barrelsF: HydrolaseECOD (develop294)
G [auth D]Peptidase_S26e6b23D1 A: alpha bundlesX: TIM beta/alpha-barrelH: TIM barrelsT: TIM barrelsF: Peptidase_S26ECOD (develop294)
E [auth C]Peptidase_S26e6b23C1 A: alpha bundlesX: TIM beta/alpha-barrelH: TIM barrelsT: TIM barrelsF: Peptidase_S26ECOD (develop294)
D [auth B]Peptidase_S26e6b23B1 A: alpha bundlesX: TIM beta/alpha-barrelH: TIM barrelsT: TIM barrelsF: Peptidase_S26ECOD (develop294)
APeptidase_S26e6b23A1 A: alpha bundlesX: TIM beta/alpha-barrelH: TIM barrelsT: TIM barrelsF: Peptidase_S26ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
D [auth B],
E [auth C],
G [auth D]		PF05065Phage capsid family (Phage_capsid)Phage capsid family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth a],
C [auth b],
F [auth c],
H [auth d]		Capsid morphogenesis B protein- - -
A,
D [auth B],
E [auth C],
G [auth D]		Major head protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth a],
C [auth b],
F [auth c],
H [auth d]		IPR031999Pathogenicity island protein gp6, StaphylococcusFamily
B [auth a],
C [auth b],
F [auth c],
H [auth d]		IPR038540Pathogenicity island protein gp6 superfamilyHomologous Superfamily
A,
D [auth B],
E [auth C],
G [auth D]		IPR054612Phage capsid-like, C-terminalDomain
A,
D [auth B],
E [auth C],
G [auth D]		IPR024455Phage capsidFamily