5TZN
Structure of the viral immunoevasin m12 (Smith) bound to the natural killer cell receptor NKR-P1B (B6)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5tzna1 | Alpha and beta proteins (a+b) | C-type lectin-like | C-type lectin-like | automated matches | automated matches | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
A | d5tzna2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
D [auth W] | d5tznw_ | Alpha and beta proteins (a+b) | C-type lectin-like | C-type lectin-like | automated matches | automated matches | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | C-type lectin-like | 8065452 | 3001261 | SCOP2B (2022-06-29) |
D [auth W] | SCOP2B Superfamily | C-type lectin-like | 8065452 | 3001261 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00059 | e5tznA1 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: C-type lectin-like | F: PF00059 | ECOD (1.6) |
D [auth W] | PF00059 | e5tznW1 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: C-type lectin-like | F: PF00059 | ECOD (1.6) |
B [auth F] | PF12216 | e5tznF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: m04 immunoevasin (From Topology) | T: m04 immunoevasin | F: PF12216 | ECOD (1.6) |
C [auth G] | PF12216 | e5tznG1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: m04 immunoevasin (From Topology) | T: m04 immunoevasin | F: PF12216 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.100.10 | Alpha Beta | Roll | Mannose-Binding Protein A | Chain A | CATH (4.3.0) |
D [auth W] | 3.10.100.10 | Alpha Beta | Roll | Mannose-Binding Protein A | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D [auth W] | PF00059 | Lectin C-type domain (Lectin_C) | Lectin C-type domain | This family includes both long and short form C-type | Domain |
B [auth F], C [auth G] | PF12216 | Immune evasion protein (m04gp34like) | Immune evasion protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, D [auth W] | IPR001304 | C-type lectin-like | Domain |
A, D [auth W] | IPR016186 | C-type lectin-like/link domain superfamily | Homologous Superfamily |
A, D [auth W] | IPR033992 | Natural killer cell receptor-like, C-type lectin-like domain | Domain |
A, D [auth W] | IPR016187 | C-type lectin fold | Homologous Superfamily |
B [auth F], C [auth G] | IPR022022 | Immune evasion protein | Family |