Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
FSCOP2 FamilyASTN-2 EGF-like domain8052124 4007581 SCOP2 (2022-06-29)
FSCOP2 FamilyMACPF-like8049565 4006548 SCOP2 (2022-06-29)
FSCOP2 FamilyLDL receptor-like module8052140 4003373 SCOP2 (2022-06-29)
FSCOP2 FamilyTSP-1 type 1 repeat8052126 4003415 SCOP2 (2022-06-29)
FSCOP2 SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2 (2022-06-29)
FSCOP2 SuperfamilyMAC/CDC-like8052039 3002081 SCOP2 (2022-06-29)
FSCOP2 SuperfamilyLDL receptor-like module8052141 3000728 SCOP2 (2022-06-29)
FSCOP2 SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2 (2022-06-29)
GSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
USCOP2B SuperfamilyMAC/CDC-like8052039 3002081 SCOP2B (2022-06-29)
USCOP2B SuperfamilyTSP-1 type 1 repeat8052127 3000814 SCOP2B (2022-06-29)
USCOP2B SuperfamilyLDL receptor-like module8052141 3000728 SCOP2B (2022-06-29)
USCOP2B SuperfamilyEGF/Laminin-like8052125 3000412 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CMACPFe5fmwC1 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
ChEGF_4e5fmwC3 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
CLdl_recept_ae5fmwC4 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
CTSP_1_1e5fmwC2 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
FMACPFe5fmwF2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
FhEGF_4e5fmwF3 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
FLdl_recept_ae5fmwF1 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
FTSP_1_1e5fmwF4 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
GMACPFe5fmwG3 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
GhEGF_4e5fmwG1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
GLdl_recept_ae5fmwG2 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
GTSP_1_1e5fmwG4 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
IMACPFe5fmwI4 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
IhEGF_4e5fmwI2 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
ILdl_recept_ae5fmwI3 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
ITSP_1_1e5fmwI1 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
JMACPFe5fmwJ1 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
JhEGF_4e5fmwJ4 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
JLdl_recept_ae5fmwJ2 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
JTSP_1_1e5fmwJ3 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
KMACPFe5fmwK2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
KhEGF_4e5fmwK4 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
KLdl_recept_ae5fmwK1 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
KTSP_1_1e5fmwK3 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
MMACPFe5fmwM3 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
MhEGF_4e5fmwM1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
MLdl_recept_ae5fmwM4 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
MTSP_1_1e5fmwM2 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
OMACPFe5fmwO2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
OhEGF_4e5fmwO3 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
OLdl_recept_ae5fmwO1 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
OTSP_1_1e5fmwO4 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
PMACPFe5fmwP3 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
PhEGF_4e5fmwP2 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
PLdl_recept_ae5fmwP1 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
PTSP_1_1e5fmwP4 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
RMACPFe5fmwR2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
RhEGF_4e5fmwR4 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
RLdl_recept_ae5fmwR3 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
RTSP_1_1e5fmwR1 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
TMACPFe5fmwT2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
ThEGF_4e5fmwT4 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
TLdl_recept_ae5fmwT1 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
TTSP_1_1e5fmwT3 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
VMACPFe5fmwV4 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
VhEGF_4e5fmwV3 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
VLdl_recept_ae5fmwV2 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
VTSP_1_1e5fmwV1 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
AMACPFe5fmwA5 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
AhEGF_4e5fmwA8 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
ALdl_recept_ae5fmwA7 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
ATSP_1_1e5fmwA6 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
BMACPFe5fmwB1 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
BhEGF_4e5fmwB4 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
BLdl_recept_ae5fmwB2 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
BTSP_1_1e5fmwB3 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
DMACPFe5fmwD1 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
DhEGF_4e5fmwD3 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
DLdl_recept_ae5fmwD4 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
DTSP_1_1e5fmwD2 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
EMACPFe5fmwE2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
EhEGF_4e5fmwE1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
ELdl_recept_ae5fmwE4 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
ETSP_1_1e5fmwE3 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
HMACPFe5fmwH4 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
HhEGF_4e5fmwH1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
HLdl_recept_ae5fmwH3 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
HTSP_1_1e5fmwH2 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
LMACPFe5fmwL4 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
LhEGF_4e5fmwL1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
LLdl_recept_ae5fmwL2 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
LTSP_1_1e5fmwL3 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
NMACPFe5fmwN3 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
NhEGF_4e5fmwN2 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
NLdl_recept_ae5fmwN1 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
NTSP_1_1e5fmwN4 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
QMACPFe5fmwQ2 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
QhEGF_4e5fmwQ1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
QLdl_recept_ae5fmwQ3 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
QTSP_1_1e5fmwQ4 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
SMACPFe5fmwS3 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
ShEGF_4e5fmwS4 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
SLdl_recept_ae5fmwS1 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
STSP_1_1e5fmwS2 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)
UMACPFe5fmwU1 A: beta complex topologyX: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology)T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domainsF: MACPFECOD (1.6)
UhEGF_4e5fmwU4 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_4ECOD (1.6)
ULdl_recept_ae5fmwU2 A: few secondary structure elementsX: EGF-likeH: LDL receptor-like module (From Topology)T: LDL receptor-like moduleF: Ldl_recept_aECOD (1.6)
UTSP_1_1e5fmwU3 A: few secondary structure elementsX: TSP-1 type 1 repeat (From Topology)H: TSP-1 type 1 repeat (From Topology)T: TSP-1 type 1 repeatF: TSP_1_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00090Thrombospondin type 1 domain (TSP_1)Thrombospondin type 1 domain- Domain
A, B, C, D, E
PF01823MAC/Perforin domain (MACPF)MAC/Perforin domainThe membrane-attack complex (MAC) of the complement system forms transmembrane channels. These channels disrupt the phospholipid bilayer of target cells, leading to cell lysis and death. A number of proteins participate in the assembly of the MAC. Fr ...The membrane-attack complex (MAC) of the complement system forms transmembrane channels. These channels disrupt the phospholipid bilayer of target cells, leading to cell lysis and death. A number of proteins participate in the assembly of the MAC. Freshly activated C5b binds to C6 to form a C5b-6 complex, then to C7 forming the C5b-7 complex. The C5b-7 complex binds to C8, which is composed of three chains (alpha, beta, and gamma), thus forming the C5b-8 complex. C5b-8 subsequently binds to C9 and acts as a catalyst in the polymerisation of C9. Active MAC has a subunit composition of C5b-C6-C7-C8-C9{n}. Perforin is a protein found in cytolytic T-cell and killer cells. In the presence of calcium, perforin polymerises into transmembrane tubules and is capable of lysing, non-specifically, a variety of target cells. There are a number of regions of similarity in the sequences of complement components C6, C7, C8-alpha, C8-beta, C9 and perforin. The X-ray crystal structure of a MACPF domain reveals that it shares a common fold with bacterial cholesterol dependent cytolysins (Pfam:PF01289) such as perfringolysin O. Three key pieces of evidence suggests that MACPF domains and CDCs are homologous: Functional similarity (pore formation), conservation of three glycine residues at a hinge in both families and conservation of a complex core fold [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
POLYC9-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR000884Thrombospondin type-1 (TSP1) repeatRepeat
A, B, C, D, E
IPR020864Membrane attack complex component/perforin (MACPF) domainDomain
A, B, C, D, E
IPR002172Low-density lipoprotein (LDL) receptor class A repeatRepeat
A, B, C, D, E
IPR036383Thrombospondin type-1 (TSP1) repeat superfamilyHomologous Superfamily
A, B, C, D, E
IPR001862Membrane attack complex component/perforin/complement C9Family
A, B, C, D, E
IPR009030Growth factor receptor cysteine-rich domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved siteConserved Site
A, B, C, D, E
IPR036055LDL receptor-like superfamilyHomologous Superfamily
A, B, C, D, E
IPR020863Membrane attack complex component/perforin domain, conserved siteConserved Site

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM