5ZOJ
Crystal structure of human SMAD2-MAN1 complex
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5zoja_ | All beta proteins | SMAD/FHA domain | SMAD/FHA domain | SMAD domain | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d5zojb_ | All beta proteins | SMAD/FHA domain | SMAD/FHA domain | SMAD domain | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d5zojc_ | All beta proteins | SMAD/FHA domain | SMAD/FHA domain | SMAD domain | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | SMAD/FHA domain-like | 8038261 | 3000137 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | SMAD/FHA domain-like | 8038261 | 3000137 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | SMAD/FHA domain-like | 8038261 | 3000137 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | MH2 | e5zojA1 | A: beta sandwiches | X: SMAD/FHA domain (From Topology) | H: SMAD/FHA domain (From Topology) | T: SMAD/FHA domain | F: MH2 | ECOD (1.6) |
B | MH2 | e5zojB1 | A: beta sandwiches | X: SMAD/FHA domain (From Topology) | H: SMAD/FHA domain (From Topology) | T: SMAD/FHA domain | F: MH2 | ECOD (1.6) |
C | MH2 | e5zojC1 | A: beta sandwiches | X: SMAD/FHA domain (From Topology) | H: SMAD/FHA domain (From Topology) | T: SMAD/FHA domain | F: MH2 | ECOD (1.6) |
D | RRM_1_9 | e5zojD1 | A: a+b two layers | X: Alpha-beta plaits | H: RNA-binding domain, RBD (From Topology) | T: RNA-binding domain, RBD | F: RRM_1_9 | ECOD (1.6) |
E | RRM_1_9 | e5zojE1 | A: a+b two layers | X: Alpha-beta plaits | H: RNA-binding domain, RBD (From Topology) | T: RNA-binding domain, RBD | F: RRM_1_9 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.200.10 | Mainly Beta | Sandwich | Tumour Suppressor Smad4 | CATH (4.3.0) | |
B | 2.60.200.10 | Mainly Beta | Sandwich | Tumour Suppressor Smad4 | CATH (4.3.0) | |
C | 2.60.200.10 | Mainly Beta | Sandwich | Tumour Suppressor Smad4 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03166 | MH2 domain (MH2) | MH2 domain | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036578 | SMAD MH1 domain superfamily | Homologous Superfamily | |
IPR017855 | SMAD-like domain superfamily | Homologous Superfamily | |
IPR013019 | MAD homology, MH1 | Domain | |
IPR013790 | Dwarfin | Family | |
IPR003619 | MAD homology 1, Dwarfin-type | Domain | |
IPR008984 | SMAD/FHA domain superfamily | Homologous Superfamily | |
IPR001132 | SMAD domain, Dwarfin-type | Domain | |
IPR003887 | LEM domain | Domain | |
IPR034394 | MAN1, RNA recognition motif | Domain | |
IPR052277 | Inner Nuclear Membrane ESCRT-Associated Protein | Family | |
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily | |
IPR011015 | LEM/LEM-like domain superfamily | Homologous Superfamily | |
IPR018996 | Man1/Src1-like, C-terminal | Domain | |
IPR035979 | RNA-binding domain superfamily | Homologous Superfamily | |
IPR041885 | MAN1, winged-helix domain | Homologous Superfamily |