Annotations: 5ZNM

Colicin D Central Domain and C-terminal tRNase domain

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Colicin D/E5 nuclease domain	8035540	3001283	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Colicin D/E5 nuclease domain	8035540	3001283	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	T6SS_VasJ	e5znmB1	A: beta barrels	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: T6SS_VasJ	ECOD (v294.2)
A	DnaG_DnaB_bind	e5znmA1	A: beta barrels	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: DnaG_DnaB_bind	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.10.450.200	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (utative)
A	3.10.450.200	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Colicin-D	nuclease activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity catalytic activity	defense response to bacterium biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response response to bacterium response to stress response to external stimulus response to external biotic stimulus response to biotic stimulus cellular process disruption of cell in another organism disruption of anatomical structure in another organism killing of cells of another organism defense response to bacterium biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response response to bacterium response to stress response to external stimulus response to external biotic stimulus response to biotic stimulus cellular process disruption of cell in another organism disruption of anatomical structure in another organism killing of cells of another organism cell killing	intracellular anatomical structure cellular anatomical structure extrachromosomal circular DNA extrachromosomal DNA

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR024440	Colicin D, C-terminal	Domain
A, B	IPR024575	Cloacin/colicin	Family
A, B	IPR038233	Colicin D/E5 nuclease domain superfamily	Homologous Superfamily
A, B	IPR016128	Pyosin/cloacin translocation domain	Domain
A, B	IPR036302	Pyosin/cloacin translocation domain superfamily	Homologous Superfamily
A, B	IPR037178	Colicin D, C-terminal domain superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.