5V2I
Crystal structure of a mutant glycosylasparaginase (G172D) that causes the genetic disease Aspartylglucosaminuria
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5v2ia_ | Alpha and beta proteins (a+b) | Ntn hydrolase-like | N-terminal nucleophile aminohydrolases (Ntn hydrolases) | (Glycosyl)asparaginase | Glycosylasparaginase (aspartylglucosaminidase, AGA) | (Elizabethkingia meningoseptica ) [TaxId: 238 ], | SCOPe (2.08) |
B | d5v2ib_ | Alpha and beta proteins (a+b) | Ntn hydrolase-like | N-terminal nucleophile aminohydrolases (Ntn hydrolases) | (Glycosyl)asparaginase | Glycosylasparaginase (aspartylglucosaminidase, AGA) | (Elizabethkingia meningoseptica ) [TaxId: 238 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01112 | e5v2iA1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: (Glycosyl)asparaginase | F: PF01112 | ECOD (1.6) |
B | PF01112 | e5v2iB1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: (Glycosyl)asparaginase | F: PF01112 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01112 | Asparaginase (Asparaginase_2) | Asparaginase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Glycosylasparaginase |
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InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029055 | Nucleophile aminohydrolases, N-terminal | Homologous Superfamily | |
IPR000246 | Peptidase T2, asparaginase 2 | Family | |
IPR019546 | Twin-arginine translocation pathway, signal sequence, bacterial/archaeal | Conserved Site |