Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
A [auth K]d5sx5k2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
A [auth K]d5sx5k1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
C [auth L]d5sx5l2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
C [auth L]d5sx5l1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
B [auth J]d5sx5j1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
B [auth J]d5sx5j2 Artifacts Tags Tags Tags N-terminal Tags (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
D [auth H]d5sx5h1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
D [auth H]d5sx5h2 Artifacts Tags Tags Tags N-terminal Tags (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
E [auth M]d5sx5m1 Alpha and beta proteins (a/b) Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like L domain automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
E [auth M]d5sx5m2 Small proteins Knottins (small inhibitors, toxins, lectins) Growth factor receptor domain automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
E [auth M]d5sx5m4 Artifacts Tags Tags Tags C-terminal Tags Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
E [auth M]d5sx5m3 Artifacts Tags Tags Tags N-terminal Tags Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
F [auth N]d5sx5n1 Alpha and beta proteins (a/b) Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) L domain-like L domain automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
F [auth N]d5sx5n2 Small proteins Knottins (small inhibitors, toxins, lectins) Growth factor receptor domain automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
F [auth N]d5sx5n3 Artifacts Tags Tags Tags N-terminal Tags Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth M]SCOP2B SuperfamilyL domain-like8038760 3001010 SCOP2B (2022-06-29)
E [auth M]SCOP2B SuperfamilyGrowth factor receptor domain-like8038763 3000398 SCOP2B (2022-06-29)
F [auth N]SCOP2B SuperfamilyGrowth factor receptor domain-like8038763 3000398 SCOP2B (2022-06-29)
F [auth N]SCOP2B SuperfamilyL domain-like8038760 3001010 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth K]C1-set_4e5sx5K1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_4ECOD (1.6)
A [auth K]V-sete5sx5K2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
C [auth L]C1-set_4e5sx5L1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_4ECOD (1.6)
C [auth L]V-sete5sx5L2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
B [auth J]V-set_8e5sx5J2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
B [auth J]C1-set_1e5sx5J1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
D [auth H]V-set_8e5sx5H2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
D [auth H]C1-set_1e5sx5H1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
E [auth M]Recep_L_domaine5sx5M1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: Recep_L_domainECOD (1.6)
F [auth N]Recep_L_domaine5sx5N1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: Recep_L_domainECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A [auth K],
C [auth L]
Antibody Fab Fragment L-KAPPA Homo sapiens (human) IGKV1-33*01, IGKV1D-33*01, IGKJ4*01, IGKJ4*02, IGKC*01 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-2_KAPPA IMGT (202415-0)
B [auth J],
D [auth H]
Antibody Fab Fragment VH-CH1 Homo sapiens (human) IGHV4-61*01, IGHV4-61*08, IGHJ3*02, IGHG2*01, IGHG2*06, IGHG2*05, IGHG2*03 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-2_KAPPA IMGT (202415-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A [auth K],
C [auth L]
Light ChainIGKV1 Kappaepidermal growth factor receptorSAbDab (2024-04-19)
B [auth J],
D [auth H]
Heavy ChainIGHV4 -epidermal growth factor receptorSAbDab (2024-04-19)

Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage

ChainNameTargetProvenance Source
A [auth K],
C [auth L]
Bafisontamab EGFR/ERBB1/HER1, MET/HGFRTherapeutic SAbDab (2024-04-19)
B [auth J],
D [auth H]
Demupitamab EGFR/ERBB1/HER1, MET/HGFRTherapeutic SAbDab (2024-04-19)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth M],
F [auth N]
PF00757Furin-like cysteine rich region (Furin-like)Furin-like cysteine rich region- Domain
E [auth M],
F [auth N]
PF01030Receptor L domain (Recep_L_domain)Receptor L domain- Repeat
E [auth M],
F [auth N]
PF14843Growth factor receptor domain IV (GF_recep_IV)Growth factor receptor domain IVThis is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (Pfam:PF00757) regulates the binding of ligands to the receptor L domains (Pfam:PF01030) [1].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth K],
C [auth L]
Panitumumab Fab Light Chain---
B [auth J],
D [auth H]
Panitumumab Fab Heavy Chain---
E [auth M],
F [auth N]
Epidermal growth factor receptor

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
E [auth M],
F [auth N]
PharosP00533