5MX0 | pdb_00005mx0

Crystal structure of human fibromodulin

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e5mx0B1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Osmotin-like	T: Osmotin-like	F:	ECOD (v294.1)
A		e5mx0A1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Osmotin-like	T: Osmotin-like	F:	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF13855	Leucine rich repeat (LRR_8)	Leucine rich repeat	-	Repeat
A, B	PF01462	Leucine rich repeat N-terminal domain (LRRNT)	Leucine rich repeat N-terminal domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Fibromodulin	-	cellular response to stimulus cellular response to growth factor stimulus cell surface receptor protein serine/threonine kinase signaling pathway regulation of cellular process response to stimulus signaling cellular response to transforming growth factor beta stimulus cell communication cellular component organization cellular component biogenesis cellular response to endogenous stimulus cellular component assembly protein-containing complex assembly cellular component organization or biogenesis cellular response to stimulus cellular response to growth factor stimulus cell surface receptor protein serine/threonine kinase signaling pathway regulation of cellular process response to stimulus signaling cellular response to transforming growth factor beta stimulus cell communication cellular component organization cellular component biogenesis cellular response to endogenous stimulus cellular component assembly protein-containing complex assembly cellular component organization or biogenesis signal transduction enzyme-linked receptor protein signaling pathway transforming growth factor beta receptor complex assembly regulation of biological process cell surface receptor signaling pathway protein-containing complex organization response to endogenous stimulus biological regulation response to transforming growth factor beta transforming growth factor beta receptor signaling pathway cellular process response to growth factor transforming growth factor beta receptor superfamily signaling pathway collagen fibril organization extracellular matrix organization extracellular structure organization external encapsulating structure organization	membrane-bounded organelle intracellular anatomical structure Golgi apparatus membrane-enclosed lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen Golgi lumen intracellular organelle cellular anatomical structure organelle lumen organelle cytoplasm extracellular matrix membrane-bounded organelle intracellular anatomical structure Golgi apparatus membrane-enclosed lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen Golgi lumen intracellular organelle cellular anatomical structure organelle lumen organelle cytoplasm extracellular matrix external encapsulating structure extracellular region lytic vacuole vacuolar lumen vacuole lysosomal lumen lysosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A, B	IPR000372	Leucine-rich repeat N-terminal domain	Domain
A, B	IPR001611	Leucine-rich repeat	Repeat
A, B	IPR050333	Small Leucine-Rich Proteoglycans	Family
A, B	IPR003591	Leucine-rich repeat, typical subtype	Repeat

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q06828	B-cell chronic lymphocytic leukemia congestive heart failure interstitial cystitis medulloblastoma pancreatic intraductal papillary-mucinous neoplasm subependymal giant cell astrocytoma breast cancer Crohn disease lung cancer ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia type 2 diabetes mellitus breast carcinoma ductal breast carcinoma in situ malignant pancreatic neoplasm B-cell chronic lymphocytic leukemia congestive heart failure interstitial cystitis medulloblastoma pancreatic intraductal papillary-mucinous neoplasm subependymal giant cell astrocytoma breast cancer Crohn disease lung cancer ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia type 2 diabetes mellitus breast carcinoma ductal breast carcinoma in situ malignant pancreatic neoplasm pancreatic ductal adenocarcinoma pituitary cancer

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.