5L46
Crystal structure of human dimethylglycine-dehydrogenase
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GCV_T_C | e5l46A1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Aminomethyltransferase beta-barrel domain | F: GCV_T_C | ECOD (1.6) |
A | KOG2844 | e5l46A2 | A: a+b two layers | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C (From Topology) | T: FAD-linked reductases-C | F: KOG2844 | ECOD (1.6) |
A | GCV_T_N1 | e5l46A4 | A: a+b two layers | X: Alpha-beta plaits | H: Aminomethyltransferase folate-binding domain (From Topology) | T: Aminomethyltransferase folate-binding domain | F: GCV_T_N1 | ECOD (1.6) |
A | DAO_1st | e5l46A3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: DAO_1st | ECOD (1.6) |
B | GCV_T_C | e5l46B3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Aminomethyltransferase beta-barrel domain | F: GCV_T_C | ECOD (1.6) |
B | KOG2844 | e5l46B2 | A: a+b two layers | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C (From Topology) | T: FAD-linked reductases-C | F: KOG2844 | ECOD (1.6) |
B | GCV_T_N1 | e5l46B5 | A: a+b two layers | X: Alpha-beta plaits | H: Aminomethyltransferase folate-binding domain (From Topology) | T: Aminomethyltransferase folate-binding domain | F: GCV_T_N1 | ECOD (1.6) |
B | DAO_1st | e5l46B4 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: DAO_1st | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16350 | FAD dependent oxidoreductase central domain (FAO_M) | FAD dependent oxidoreductase central domain | - | Family | |
PF01571 | Aminomethyltransferase folate-binding domain (GCV_T) | Aminomethyltransferase folate-binding domain | This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyses the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl tran ... | Domain | |
PF01266 | FAD dependent oxidoreductase (DAO) | FAD dependent oxidoreductase | This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1. | Domain | |
PF08669 | Glycine cleavage T-protein C-terminal barrel domain (GCV_T_C) | Glycine cleavage T-protein C-terminal barrel domain | This is a family of glycine cleavage T-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyses the catabolism of glycine in eukaryotes. The T-protein is an aminomethyl tran ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR028896 | Aminomethyltransferase-like | Family | |
IPR013977 | Aminomethyltransferase, C-terminal domain | Domain | |
IPR036188 | FAD/NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR006222 | Aminomethyltransferase, folate-binding domain | Domain | |
IPR032503 | FAD dependent oxidoreductase, central domain | Domain | |
IPR029043 | Glycine cleavage T-protein/YgfZ, C-terminal | Homologous Superfamily | |
IPR006076 | FAD dependent oxidoreductase | Domain | |
IPR027266 | GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1 | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q9UI17 | :