5JK2

Crystal structure of Treponema pallidum Tp0751 (Pallilysin)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF18663e5jk2A1 A: beta barrelsX: Lipocalins/StreptavidinH: Lipocalins (From Topology)T: LipocalinsF: PF18663ECOD (1.6)
BPF18663e5jk2B1 A: beta barrelsX: Lipocalins/StreptavidinH: Lipocalins (From Topology)T: LipocalinsF: PF18663ECOD (1.6)
DPF18663e5jk2D1 A: beta barrelsX: Lipocalins/StreptavidinH: Lipocalins (From Topology)T: LipocalinsF: PF18663ECOD (1.6)
EPF18663e5jk2E1 A: beta barrelsX: Lipocalins/StreptavidinH: Lipocalins (From Topology)T: LipocalinsF: PF18663ECOD (1.6)
FPF18663e5jk2F1 A: beta barrelsX: Lipocalins/StreptavidinH: Lipocalins (From Topology)T: LipocalinsF: PF18663ECOD (1.6)
GPF18663e5jk2G1 A: beta barrelsX: Lipocalins/StreptavidinH: Lipocalins (From Topology)T: LipocalinsF: PF18663ECOD (1.6)
IPF18663e5jk2I1 A: beta barrelsX: Lipocalins/StreptavidinH: Lipocalins (From Topology)T: LipocalinsF: PF18663ECOD (1.6)
CPF18663e5jk2C1 A: beta barrelsX: Lipocalins/StreptavidinH: Lipocalins (From Topology)T: LipocalinsF: PF18663ECOD (1.6)
HPF18663e5jk2H1 A: beta barrelsX: Lipocalins/StreptavidinH: Lipocalins (From Topology)T: LipocalinsF: PF18663ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF18663Pallilysin beta barrel domain (Pallilysin)Pallilysin beta barrel domainThe Treponema pallidum protein, Tp0751 (also known as pallilysin), possesses adhesive properties and has been previously reported to mediate attachment to the host extracellular matrix components laminin, fibronectin, and fibrinogen. Tp0751 adopts an ...The Treponema pallidum protein, Tp0751 (also known as pallilysin), possesses adhesive properties and has been previously reported to mediate attachment to the host extracellular matrix components laminin, fibronectin, and fibrinogen. Tp0751 adopts an eight-stranded beta-barrel with a profile of short conserved regions consistent with a non-canonical lipocalin fold. Lipocalins, along with fatty acid-binding proteins and avidins, are members of the calycin superfamily, which is defined by the distinct features of a central beta-barrel and a key structural signature consisting of three short conserved regions (SCR1, SCR2, and SCR3). However, Tp0751 does not contain all three conserved regions, hence it is considered an outlier to canonical lipocalins. In SCR1, there is a GxW motif [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR041037Pallilysin beta barrel domainDomain