5IP2 | pdb_00005ip2

Tomato spotted wilt tospovirus nucleocapsid protein-ssRNA complex

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth A]SCOP2 FamilyTospovirus nucleocapsid protein-like 8089913 4007690 SCOP2 (2022-06-29)
C [auth A]SCOP2 SuperfamilyPepMV Coat protein-like 8089914 3002401 SCOP2 (2022-06-29)
B [auth C]SCOP2B SuperfamilyPepMV Coat protein-like 8089914 3002401 SCOP2B (2022-06-29)
A [auth B]SCOP2B SuperfamilyPepMV Coat protein-like 8089914 3002401 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth A]e5ip2A1 A: Immunoglobulin-like beta-sandwichX: Immunoglobulin-relatedH: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeT: NopF:ECOD (20:10:01)
B [auth C]e5ip2C1 A: Immunoglobulin-like beta-sandwichX: Immunoglobulin-relatedH: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeT: NopF:ECOD (20:10:01)
A [auth B]e5ip2B1 A: Immunoglobulin-like beta-sandwichX: Immunoglobulin-relatedH: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeT: NopF:ECOD (20:10:01)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth F],
F [auth D]		RNA (5'-D(P*UP*UP*U)-3')---
D [auth E]RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')---
A [auth B],
B [auth C],
C [auth A]		Nucleoprotein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B],
B [auth C],
C [auth A]		IPR002517Tospovirus nucleocapsid proteinFamily