5HRT | pdb_00005hrt

Crystal structure of mouse autotaxin in complex with a DNA aptamer


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ABAHe5hrtA1 A: a/b three-layered sandwichesX: Alpha-beta plaitsH: SH3T: SH3F: BAHECOD (v294.1)
APhosphodiest, Metalloenzymee5hrtA6 A: a/b three-layered sandwichesX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Phosphodiest, MetalloenzymeECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A4.10.410.20 Few Secondary Structures Irregular Factor Xa Inhibitor CATH (4.3.0)
A3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit ACATH (4.3.0)
A3.40.570.10 Alpha Beta 3-Layer(aba) Sandwich Extracellular Endonuclease Chain ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01033Somatomedin B domain (Somatomedin_B)Somatomedin B domain- Family
PF01223DNA/RNA non-specific endonuclease (Endonuclease_NS)DNA/RNA non-specific endonucleaseDomain
PF01663Type I phosphodiesterase / nucleotide pyrophosphatase (Phosphodiest)Type I phosphodiesterase / nucleotide pyrophosphatase- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
modified DNA (34-MER)---
Ectonucleotide pyrophosphatase/phosphodiesterase family member 2