5H08 | pdb_00005h08

Human PTPRZ D1 domain complexed with NAZ2329

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d5h08a1	Alpha and beta proteins (a/b)	(Phosphotyrosine protein) phosphatases II	(Phosphotyrosine protein) phosphatases II	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d5h08a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	(Phosphotyrosine protein) phosphatases II	8078133	3000304	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Phage_integrase	e5h08A1	A: a/b three-layered sandwiches	X: Carbon-nitrogen hydrolase-like	H: SSHS domain in CRISPR-associated endonuclease Cas9	T: SSHS domain in CRISPR-associated endonuclease Cas9	F: Phage_integrase	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.90.190.10	Alpha Beta	Alpha-Beta Complex	Protein-Tyrosine Phosphatase	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00102	Protein-tyrosine phosphatase (Y_phosphatase)	Protein-tyrosine phosphatase		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Receptor-type tyrosine-protein phosphatase zeta	phosphoric ester hydrolase activity molecular transducer activity catalytic activity, acting on a protein phosphatase activity signaling receptor activity hydrolase activity phosphoprotein phosphatase activity hydrolase activity, acting on ester bonds protein tyrosine phosphatase activity transmembrane receptor protein phosphatase activity transmembrane signaling receptor activity transmembrane receptor protein tyrosine phosphatase activity catalytic activity cell adhesion molecule binding phosphoric ester hydrolase activity molecular transducer activity catalytic activity, acting on a protein phosphatase activity signaling receptor activity hydrolase activity phosphoprotein phosphatase activity hydrolase activity, acting on ester bonds protein tyrosine phosphatase activity transmembrane receptor protein phosphatase activity transmembrane signaling receptor activity transmembrane receptor protein tyrosine phosphatase activity catalytic activity cell adhesion molecule binding protein-containing complex binding protein binding binding integrin binding signaling receptor binding	developmental process multicellular organismal process regulation of biological process regulation of multicellular organismal development regulation of cellular process regulation of developmental process regulation of myelination biological regulation nervous system development regulation of nervous system development myelination multicellular organism development axon ensheathment ensheathment of neurons anatomical structure development developmental process multicellular organismal process regulation of biological process regulation of multicellular organismal development regulation of cellular process regulation of developmental process regulation of myelination biological regulation nervous system development regulation of nervous system development myelination multicellular organism development axon ensheathment ensheathment of neurons anatomical structure development cellular process regulation of multicellular organismal process system development central nervous system development cellular developmental process neurogenesis gliogenesis oligodendrocyte differentiation glial cell differentiation cell differentiation protein dephosphorylation dephosphorylation primary metabolic process macromolecule modification phosphate-containing compound metabolic process metabolic process protein metabolic process macromolecule metabolic process protein modification process phosphorus metabolic process oligodendrocyte progenitor proliferation cell population proliferation regulation of cell population proliferation neural precursor cell proliferation regulation of oligodendrocyte progenitor proliferation regulation of neural precursor cell proliferation neuron apoptotic process negative regulation of neuron apoptotic process negative regulation of programmed cell death regulation of apoptotic process negative regulation of biological process regulation of programmed cell death cell death negative regulation of apoptotic process negative regulation of cellular process apoptotic process programmed cell death regulation of neuron apoptotic process cellular response to stimulus response to stimulus signaling signal transduction cell communication axonogenesis cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis cellular component organization cell projection morphogenesis neuron differentiation neuron projection morphogenesis cellular component organization or biogenesis plasma membrane bounded cell projection organization axon development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis neuron development behavior system process learning or memory nervous system process cognition peptidyl-tyrosine dephosphorylation positive regulation of nervous system development positive regulation of biological process regulation of neurogenesis regulation of cell differentiation regulation of gliogenesis positive regulation of gliogenesis regulation of cell development positive regulation of developmental process positive regulation of cell differentiation positive regulation of neurogenesis positive regulation of cellular process positive regulation of oligodendrocyte differentiation positive regulation of cell development regulation of glial cell differentiation positive regulation of glial cell differentiation positive regulation of multicellular organismal process regulation of oligodendrocyte differentiation hemopoiesis hematopoietic progenitor cell differentiation	cell periphery cellular anatomical structure plasma membrane membrane perisynaptic extracellular matrix extracellular matrix synapse-associated extracellular matrix external encapsulating structure extracellular region perineuronal net specialized extracellular matrix synapse cell junction

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001148	Alpha carbonic anhydrase domain	Domain
A	IPR003595	Protein-tyrosine phosphatase, catalytic	Domain
A	IPR016130	Protein-tyrosine phosphatase, active site	Active Site
A	IPR041887	Receptor-type tyrosine-protein phosphatase, carbonic anhydrase domain	Domain
A	IPR029021	Protein-tyrosine phosphatase-like	Homologous Superfamily
A	IPR003961	Fibronectin type III	Domain
A	IPR036398	Alpha carbonic anhydrase domain superfamily	Homologous Superfamily
A	IPR000242	Tyrosine-specific protein phosphatase, PTPase domain	Domain
A	IPR000387	Tyrosine-specific protein phosphatases domain	Domain
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR050348	Protein-Tyrosine Phosphatase	Family
A	IPR036116	Fibronectin type III superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P23471	bagassosis pneumoconiosis pilocytic astrocytoma schizophrenia astrocytic tumor breast carcinoma glioblastoma Helicobacter pylori infectious disease malignant colon neoplasm nasopharyngeal carcinoma ovarian cancer pituitary cancer cystic fibrosis Helicobacter Infections interstitial cystitis bagassosis pneumoconiosis pilocytic astrocytoma schizophrenia astrocytic tumor breast carcinoma glioblastoma Helicobacter pylori infectious disease malignant colon neoplasm nasopharyngeal carcinoma ovarian cancer pituitary cancer cystic fibrosis Helicobacter Infections interstitial cystitis malignant glioma non-small cell lung carcinoma ovarian carcinoma breast cancer esophageal adenocarcinoma Helicobacter pylori infection, susceptibility to large cell medulloblastoma medulloblastoma oligodendroglioma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.