CRYSTAL STRUCTURE OF THE INNER DOMAIN OF CLADE A/E HIV-1 GP120 IN COMPLEX WITH THE ADCC-POTENT RHESUS MACAQUE ANTIBODY JR4
External Resource: Annotation
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A [auth G] | GP120_1st | e5fcuG1 | A: a+b two layers | X: gp120 inner domain (From Topology) | H: gp120 inner domain (From Topology) | T: gp120 inner domain | F: GP120_1st | ECOD (1.6) |
B [auth H] | V-set_8 | e5fcuH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
B [auth H] | C1-set_1 | e5fcuH2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
C [auth L] | C1-set_1 | e5fcuL2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
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B [auth H] | JR4 Fab | VH-CH1 | Macaca mulatta (Rhesus monkey) | IGHV4-150*01, IGHJ5-2*02, IGHG1*02, IGHG1*01 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_LAMBDA | IMGT (202436-0) |
C [auth L] | JR4 Fab | L-LAMBDA | Macaca mulatta (Rhesus monkey) | IGLV1S6*01, IGLJ6*01, IGLC6*01 | V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA | IG | FAB-GAMMA-1_LAMBDA | IMGT (202436-0) |
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
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B [auth H] | Heavy Chain | IGHV4 | - | clade a/e 93th057 hiv-1 gp120 core | SAbDab (2024-09-13) |
C [auth L] | Light Chain | IGLV1 | Lambda | clade a/e 93th057 hiv-1 gp120 core | SAbDab (2024-09-13) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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A [auth G] | clade A/E 93TH057 HIV-1 gp120 core | - | - | |
B [auth H] | JR4 FAB HEAVY CHAIN | - | - | - |
C [auth L] | JR4 FAB LIGHT CHAIN | - | - | - |