5EK6 | pdb_00005ek6

Thermostable aldehyde dehydrogenase from Pyrobaculum sp. 1860 complexed with NADP and isobutyraldehyde

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d5ek6h_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	(Pyrobaculum ferrireducens ) [TaxId: 1104324 ],	SCOPe (2.08)
G	d5ek6g_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	(Pyrobaculum ferrireducens ) [TaxId: 1104324 ],	SCOPe (2.08)
F	d5ek6f_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	(Pyrobaculum ferrireducens ) [TaxId: 1104324 ],	SCOPe (2.08)
E	d5ek6e_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	(Pyrobaculum ferrireducens ) [TaxId: 1104324 ],	SCOPe (2.08)
D	d5ek6d_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	(Pyrobaculum ferrireducens ) [TaxId: 1104324 ],	SCOPe (2.08)
C	d5ek6c_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	(Pyrobaculum ferrireducens ) [TaxId: 1104324 ],	SCOPe (2.08)
B	d5ek6b_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	(Pyrobaculum ferrireducens ) [TaxId: 1104324 ],	SCOPe (2.08)
A	d5ek6a_	Alpha and beta proteins (a/b)	ALDH-like	ALDH-like	automated matches	automated matches	(Pyrobaculum ferrireducens ) [TaxId: 1104324 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	ALDH-like	8065570	3001479	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	ALDH-like	8065570	3001479	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	ALDH-like	8065570	3001479	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	ALDH-like	8065570	3001479	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	ALDH-like	8065570	3001479	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	ALDH-like	8065570	3001479	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	ALDH-like	8065570	3001479	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	ALDH-like	8065570	3001479	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	PK_Tyr_Ser-Thr	e5ek6H1	A: a/b three-layered sandwiches	X: Type II ABC importer transmembrane domain fold	H: DNA mismatch repair protein MutL regulatory subdomain	T: DNA mismatch repair protein MutL regulatory subdomain	F: PK_Tyr_Ser-Thr	ECOD (v294.1)
G	PK_Tyr_Ser-Thr	e5ek6G1	A: a/b three-layered sandwiches	X: Type II ABC importer transmembrane domain fold	H: DNA mismatch repair protein MutL regulatory subdomain	T: DNA mismatch repair protein MutL regulatory subdomain	F: PK_Tyr_Ser-Thr	ECOD (v294.1)
F	PK_Tyr_Ser-Thr	e5ek6F1	A: a/b three-layered sandwiches	X: Type II ABC importer transmembrane domain fold	H: DNA mismatch repair protein MutL regulatory subdomain	T: DNA mismatch repair protein MutL regulatory subdomain	F: PK_Tyr_Ser-Thr	ECOD (v294.1)
E	PK_Tyr_Ser-Thr	e5ek6E1	A: a/b three-layered sandwiches	X: Type II ABC importer transmembrane domain fold	H: DNA mismatch repair protein MutL regulatory subdomain	T: DNA mismatch repair protein MutL regulatory subdomain	F: PK_Tyr_Ser-Thr	ECOD (v294.1)
D	PK_Tyr_Ser-Thr	e5ek6D1	A: a/b three-layered sandwiches	X: Type II ABC importer transmembrane domain fold	H: DNA mismatch repair protein MutL regulatory subdomain	T: DNA mismatch repair protein MutL regulatory subdomain	F: PK_Tyr_Ser-Thr	ECOD (v294.1)
C	PK_Tyr_Ser-Thr	e5ek6C1	A: a/b three-layered sandwiches	X: Type II ABC importer transmembrane domain fold	H: DNA mismatch repair protein MutL regulatory subdomain	T: DNA mismatch repair protein MutL regulatory subdomain	F: PK_Tyr_Ser-Thr	ECOD (v294.1)
B	PK_Tyr_Ser-Thr	e5ek6B1	A: a/b three-layered sandwiches	X: Type II ABC importer transmembrane domain fold	H: DNA mismatch repair protein MutL regulatory subdomain	T: DNA mismatch repair protein MutL regulatory subdomain	F: PK_Tyr_Ser-Thr	ECOD (v294.1)
A	PK_Tyr_Ser-Thr	e5ek6A1	A: a/b three-layered sandwiches	X: Type II ABC importer transmembrane domain fold	H: DNA mismatch repair protein MutL regulatory subdomain	T: DNA mismatch repair protein MutL regulatory subdomain	F: PK_Tyr_Ser-Thr	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
H	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
G	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
G	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
F	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
F	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
E	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
E	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
D	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
D	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
C	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
C	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
B	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
B	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)
A	3.40.605.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 1	CATH (4.3.0)
A	3.40.309.10	Alpha Beta	3-Layer(aba) Sandwich	Aldehyde Dehydrogenase	Chain A, domain 2	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Aldehyde dehydrogenase	oxidoreductase activity oxidoreductase activity, acting on the aldehyde or oxo group of donors catalytic activity oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR015590	Aldehyde dehydrogenase domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR016161	Aldehyde/histidinol dehydrogenase	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR016162	Aldehyde dehydrogenase, N-terminal	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR016163	Aldehyde dehydrogenase, C-terminal	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.