5DMP | pdb_00005dmp

Structure of the Archaeal NHEJ Phosphoesterase from Methanocella paludicola.

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	LigD phosphoesterase-like	8048544	4006141	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	NHEJ phosphoesterases-like	8092050	3002555	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e5dmpA1	A: Hsp90 co-chaperone CDC37 middle domain	X: Nucleoplasmin-like/VP (viral coat and capsid proteins)	H: Nucleoplasmin-like/VP (viral coat and capsid proteins)	T: Peripla_BP_4	F:	ECOD (20:10:01)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR014144	DNA ligase D, 3'-phosphoesterase domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.