5C3I
Crystal structure of the quaternary complex of histone H3-H4 heterodimer with chaperone ASF1 and the replicative helicase subunit MCM2
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | ASF1-like | 8055367 | 3002057 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | ASF1-like | 8055367 | 3002057 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | ASF1-like | 8055367 | 3002057 | SCOP2B (2022-06-29) |
M | SCOP2B Superfamily | ASF1-like | 8055367 | 3002057 | SCOP2B (2022-06-29) |
Q | SCOP2B Superfamily | ASF1-like | 8055367 | 3002057 | SCOP2B (2022-06-29) |
U | SCOP2B Superfamily | ASF1-like | 8055367 | 3002057 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
O | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
S | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
W | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | MCM2 histone-binding domains (HBDs) | 8107353 | 3002871 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | MCM2 histone-binding domains (HBDs) | 8107353 | 3002871 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | MCM2 histone-binding domains (HBDs) | 8107353 | 3002871 | SCOP2B (2022-06-29) |
P | SCOP2B Superfamily | MCM2 histone-binding domains (HBDs) | 8107353 | 3002871 | SCOP2B (2022-06-29) |
X | SCOP2B Superfamily | MCM2 histone-binding domains (HBDs) | 8107353 | 3002871 | SCOP2B (2022-06-29) |
T | SCOP2B Superfamily | MCM2 histone-binding domains (HBDs) | 8107353 | 3002871 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | ASF1_hist_chap | e5c3iA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: ASF1_hist_chap | ECOD (1.6) |
E | ASF1_hist_chap | e5c3iE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: ASF1_hist_chap | ECOD (1.6) |
I | ASF1_hist_chap | e5c3iI1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: ASF1_hist_chap | ECOD (1.6) |
M | ASF1_hist_chap | e5c3iM1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: ASF1_hist_chap | ECOD (1.6) |
Q | ASF1_hist_chap | e5c3iQ1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: ASF1_hist_chap | ECOD (1.6) |
U | ASF1_hist_chap | e5c3iU1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: ASF1_hist_chap | ECOD (1.6) |
B | Histone | e5c3iB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
R | Histone | e5c3iR1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
F | Histone | e5c3iF1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
J | Histone | e5c3iJ1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
N | Histone | e5c3iN1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
V | Histone | e5c3iV1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
C | Histone_1 | e5c3iC1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
G | Histone_1 | e5c3iG1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
K | Histone_1 | e5c3iK1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
O | Histone_1 | e5c3iO1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
S | Histone_1 | e5c3iS1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
W | Histone_1 | e5c3iW1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04729 | ASF1 like histone chaperone (ASF1_hist_chap) | ASF1 like histone chaperone | - | Family | |
PF00125 | Core histone H2A/H2B/H3/H4 (Histone) | Core histone H2A/H2B/H3/H4 | - | Domain | |
PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain | |
PF12619 | Mini-chromosome maintenance protein 2 (MCM2_N) | Mini-chromosome maintenance protein 2 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036747 | Histone chaperone ASF1-like superfamily | Homologous Superfamily | |
IPR006818 | Histone chaperone ASF1-like | Family | |
IPR009072 | Histone-fold | Homologous Superfamily | |
IPR007125 | Histone H2A/H2B/H3 | Domain | |
IPR000164 | Histone H3/CENP-A | Family | |
IPR009072 | Histone-fold | Homologous Superfamily | |
IPR035425 | CENP-T/Histone H4, histone fold | Domain | |
IPR001951 | Histone H4 | Family | |
IPR019809 | Histone H4, conserved site | Conserved Site | |
IPR004823 | TATA box binding protein associated factor (TAF), histone-like fold domain | Domain | |
IPR031327 | Mini-chromosome maintenance protein | Family | |
IPR018525 | Mini-chromosome maintenance, conserved site | Conserved Site | |
IPR001208 | MCM domain | Domain | |
IPR041562 | MCM, AAA-lid domain | Domain | |
IPR008045 | DNA replication licensing factor Mcm2 | Family | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR027925 | MCM, N-terminal domain | Domain | |
IPR033762 | MCM OB domain | Domain | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily |