5BY3 | pdb_00005by3

A novel family GH115 4-O-Methyl-alpha-glucuronidase, BtGH115A, with specificity for decorated arabinogalactans

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	GH115 catalytic domain-like	8044835	4004167	SCOP2 (2022-06-29)
A	SCOP2 Family	GH115 N-terminal domain-like	8053404	4007606	SCOP2 (2022-06-29)
A	SCOP2 Family	GH115 postcatalytic domain-like	8053406	4007607	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	(Trans)glycosidases	8053403	3000313	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	beta-N-acetylhexosaminidase-like domain	8053405	3000192	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	galactose-binding domain-like	8053407	3000087	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Anillin	e5by3A1	A: a/b three-layered sandwiches	X: jelly-roll	H: Acetamidase/Formamidase-like	T: SGNH hydrolase	F: Anillin	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.379.10	Alpha Beta	2-Layer Sandwich	Chitobiase	domain 2	CATH (utative)
A	3.20.20.520	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosyl hydrolase family 115	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF15979	Glycosyl hydrolase family 115 (Glyco_hydro_115)	Glycosyl hydrolase family 115	-	Family
A	PF17829	Glycosyl hydrolase family 115 C-terminal domain (GH115_C)	Glycosyl hydrolase family 115 C-terminal domain	This domain is found at the C-terminus of glycosyl hydrolase family 115 proteins [1]. This domain has a beta-sandwich fold [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	BtGH115A	hydrolase activity catalytic activity	carbohydrate metabolic process primary metabolic process metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR042301	Glycosyl hydrolase 115 superfamily	Homologous Superfamily
A	IPR041437	Gylcosyl hydrolase 115 C-terminal domain	Domain
A	IPR029018	Beta-hexosaminidase-like, domain 2	Homologous Superfamily
A	IPR031924	Glycosyl hydrolase family 115	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.