5B7W | pdb_00005b7w

Crystal structure of the YajQ-family protein XC_3703 from Xanthomonas campestris pv.campestris

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DUF520_N	e5b7wA1	A: a+b two layers	X: Alpha-beta plaits	H: YajQ-like (From Topology)	T: YajQ-like	F: DUF520_N	ECOD (1.6)
A	DUF520_C	e5b7wA2	A: a+b two layers	X: Alpha-beta plaits	H: YajQ-like (From Topology)	T: YajQ-like	F: DUF520_C	ECOD (1.6)
B	DUF520_N	e5b7wB1	A: a+b two layers	X: Alpha-beta plaits	H: YajQ-like (From Topology)	T: YajQ-like	F: DUF520_N	ECOD (1.6)
B	DUF520_C	e5b7wB2	A: a+b two layers	X: Alpha-beta plaits	H: YajQ-like (From Topology)	T: YajQ-like	F: DUF520_C	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.30.70.860	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
A	3.30.70.990	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	YajQ-like, domain 2	CATH (4.3.0)
B	3.30.70.860	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
B	3.30.70.990	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	YajQ-like, domain 2	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF04461	Nucleotide-binding protein YajQ-like (YajQ)	Nucleotide-binding protein YajQ-like	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	UPF0234 protein XC_3703	binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR007551	Nucleotide-binding protein YajQ/Smlt4090-like	Family
A, B	IPR036183	YajQ-like superfamily	Homologous Superfamily
A, B	IPR035570	UPF0234, N-terminal	Homologous Superfamily
A, B	IPR035571	UPF0234-like, C-terminal	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.