4ZOQ

Crystal Structure of a Lanthipeptide Protease

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF22146	e4zoqA1	A: a+b two layers	X: Alpha-beta plaits	H: Protease propeptides/inhibitors (From Topology)	T: Protease propeptides/inhibitors	F: PF22146	ECOD (1.6)
C [auth B]	PF22146	e4zoqB1	A: a+b two layers	X: Alpha-beta plaits	H: Protease propeptides/inhibitors (From Topology)	T: Protease propeptides/inhibitors	F: PF22146	ECOD (1.6)
E [auth C]	PF22146	e4zoqC1	A: a+b two layers	X: Alpha-beta plaits	H: Protease propeptides/inhibitors (From Topology)	T: Protease propeptides/inhibitors	F: PF22146	ECOD (1.6)
G [auth D]	PF22146	e4zoqD1	A: a+b two layers	X: Alpha-beta plaits	H: Protease propeptides/inhibitors (From Topology)	T: Protease propeptides/inhibitors	F: PF22146	ECOD (1.6)
I [auth E]	PF22146	e4zoqE1	A: a+b two layers	X: Alpha-beta plaits	H: Protease propeptides/inhibitors (From Topology)	T: Protease propeptides/inhibitors	F: PF22146	ECOD (1.6)
K [auth F]	PF22146	e4zoqF1	A: a+b two layers	X: Alpha-beta plaits	H: Protease propeptides/inhibitors (From Topology)	T: Protease propeptides/inhibitors	F: PF22146	ECOD (1.6)
B [auth I]	PF00082	e4zoqI1	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Subtilisin-like (From Topology)	T: Subtilisin-like	F: PF00082	ECOD (1.6)
D [auth J]	PF00082	e4zoqJ1	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Subtilisin-like (From Topology)	T: Subtilisin-like	F: PF00082	ECOD (1.6)
F [auth K]	PF00082	e4zoqK1	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Subtilisin-like (From Topology)	T: Subtilisin-like	F: PF00082	ECOD (1.6)
H [auth L]	PF00082	e4zoqL1	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Subtilisin-like (From Topology)	T: Subtilisin-like	F: PF00082	ECOD (1.6)
J [auth M]	PF00082	e4zoqM1	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Subtilisin-like (From Topology)	T: Subtilisin-like	F: PF00082	ECOD (1.6)
L [auth N]	PF00082	e4zoqN1	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Subtilisin-like (From Topology)	T: Subtilisin-like	F: PF00082	ECOD (1.6)
N [auth O]	PF00082	e4zoqO1	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Subtilisin-like (From Topology)	T: Subtilisin-like	F: PF00082	ECOD (1.6)
P	PF00082	e4zoqP1	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Subtilisin-like (From Topology)	T: Subtilisin-like	F: PF00082	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B [auth I]	3.40.50.200	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Peptidase S8/S53 domain	CATH (4.3.0)
D [auth J]	3.40.50.200	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Peptidase S8/S53 domain	CATH (4.3.0)
F [auth K]	3.40.50.200	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Peptidase S8/S53 domain	CATH (4.3.0)
H [auth L]	3.40.50.200	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Peptidase S8/S53 domain	CATH (4.3.0)
J [auth M]	3.40.50.200	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Peptidase S8/S53 domain	CATH (4.3.0)
L [auth N]	3.40.50.200	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Peptidase S8/S53 domain	CATH (4.3.0)
N [auth O]	3.40.50.200	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Peptidase S8/S53 domain	CATH (4.3.0)
P	3.40.50.200	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Peptidase S8/S53 domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth I], D [auth J], F [auth K], H [auth L], J [auth M], B [auth I], D [auth J], F [auth K], H [auth L], J [auth M], L [auth N], N [auth O], P	PF00082	Subtilase family (Peptidase_S8)	Subtilase family	Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see Pfam:PF00089). Structure is an alpha/beta fold containing a 7 ...	Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see Pfam:PF00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, C [auth B], E [auth C], G [auth D], I [auth E], A, C [auth B], E [auth C], G [auth D], I [auth E], K [auth F], M [auth G], O [auth H]	Intracellular serine protease	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity	organic substance metabolic process organonitrogen compound metabolic process proteolysis metabolic process primary metabolic process protein metabolic process macromolecule metabolic process	-
B [auth I], D [auth J], F [auth K], H [auth L], J [auth M], B [auth I], D [auth J], F [auth K], H [auth L], J [auth M], L [auth N], N [auth O], P	Intracellular serine protease	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity	organic substance metabolic process organonitrogen compound metabolic process proteolysis metabolic process primary metabolic process protein metabolic process macromolecule metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C [auth B], E [auth C], G [auth D], I [auth E], A, C [auth B], E [auth C], G [auth D], I [auth E], K [auth F], M [auth G], O [auth H]	IPR015500	Peptidase S8, subtilisin-related	Family
A, C [auth B], E [auth C], G [auth D], I [auth E], A, C [auth B], E [auth C], G [auth D], I [auth E], K [auth F], M [auth G], O [auth H]	IPR023828	Peptidase S8, subtilisin, Ser-active site	Active Site
A, C [auth B], E [auth C], G [auth D], I [auth E], A, C [auth B], E [auth C], G [auth D], I [auth E], K [auth F], M [auth G], O [auth H]	IPR036852	Peptidase S8/S53 domain superfamily	Homologous Superfamily
A, C [auth B], E [auth C], G [auth D], I [auth E], A, C [auth B], E [auth C], G [auth D], I [auth E], K [auth F], M [auth G], O [auth H]	IPR023827	Peptidase S8, subtilisin, Asp-active site	Active Site
A, C [auth B], E [auth C], G [auth D], I [auth E], A, C [auth B], E [auth C], G [auth D], I [auth E], K [auth F], M [auth G], O [auth H]	IPR000209	Peptidase S8/S53 domain	Domain
B [auth I], D [auth J], F [auth K], H [auth L], J [auth M], B [auth I], D [auth J], F [auth K], H [auth L], J [auth M], L [auth N], N [auth O], P	IPR015500	Peptidase S8, subtilisin-related	Family
B [auth I], D [auth J], F [auth K], H [auth L], J [auth M], B [auth I], D [auth J], F [auth K], H [auth L], J [auth M], L [auth N], N [auth O], P	IPR023828	Peptidase S8, subtilisin, Ser-active site	Active Site
B [auth I], D [auth J], F [auth K], H [auth L], J [auth M], B [auth I], D [auth J], F [auth K], H [auth L], J [auth M], L [auth N], N [auth O], P	IPR036852	Peptidase S8/S53 domain superfamily	Homologous Superfamily
B [auth I], D [auth J], F [auth K], H [auth L], J [auth M], B [auth I], D [auth J], F [auth K], H [auth L], J [auth M], L [auth N], N [auth O], P	IPR023827	Peptidase S8, subtilisin, Asp-active site	Active Site
B [auth I], D [auth J], F [auth K], H [auth L], J [auth M], B [auth I], D [auth J], F [auth K], H [auth L], J [auth M], L [auth N], N [auth O], P	IPR000209	Peptidase S8/S53 domain	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.