Crystal structure of glyceraldehyde oxidoreductase
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | d4zohc2 | All alpha proteins | CO dehydrogenase ISP C-domain like | CO dehydrogenase ISP C-domain like | automated matches | automated matches | (Sulfurisphaera tokodaii str. 7 ) [TaxId: 273063 ], | SCOPe (2.08) |
| C | d4zohc1 | Alpha and beta proteins (a+b) | beta-Grasp (ubiquitin-like) | 2Fe-2S ferredoxin-like | automated matches | automated matches | (Sulfurisphaera tokodaii str. 7 ) [TaxId: 273063 ], | SCOPe (2.08) |
| B | d4zohb2 | Alpha and beta proteins (a+b) | CO dehydrogenase flavoprotein C-domain-like | CO dehydrogenase flavoprotein C-terminal domain-like | automated matches | automated matches | (Sulfurisphaera tokodaii str. 7 ) [TaxId: 273063 ], | SCOPe (2.08) |
| B | d4zohb1 | Alpha and beta proteins (a+b) | FAD-binding/transporter-associated domain-like | FAD-binding/transporter-associated domain-like | automated matches | automated matches | (Sulfurisphaera tokodaii str. 7 ) [TaxId: 273063 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | Molybdenum cofactor-binding domain | 8100405 | 4001972 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | CO dehydrogenase molybdoprotein N-domain-like | 8101105 | 4001129 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Molybdenum cofactor-binding domain | 8100406 | 3000625 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | CO dehydrogenase molybdoprotein N-domain-like | 8101106 | 3000847 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | BD-FAE | e4zohC1 | A: beta barrels | X: HhH/H2TH | H: Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein | T: Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein | F: BD-FAE | ECOD (v294.2) |
| B | BD-FAE | e4zohB1 | A: beta barrels | X: HhH/H2TH | H: Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein | T: Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein | F: BD-FAE | ECOD (v294.2) |
| A | BD-FAE | e4zohA2 | A: beta barrels | X: HhH/H2TH | H: Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein | T: Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein | F: BD-FAE | ECOD (v294.2) |
| A | p450 | e4zohA1 | A: beta barrels | X: omega toxin-like | H: omega toxin-related | T: omega toxin-related | F: p450 | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 3.10.20.30 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Beta-grasp domain | CATH (4.3.0) |
| C | 1.10.150.120 | Mainly Alpha | Orthogonal Bundle | DNA polymerase | domain 1 | CATH (4.3.0) |
| B | 3.30.43.10 | Alpha Beta | 2-Layer Sandwich | Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase | domain 2 | CATH (4.3.0) |
| B | 3.30.465.10 | Alpha Beta | 2-Layer Sandwich | Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase | domain 3 | CATH (4.3.0) |
| B | 3.30.390.50 | Alpha Beta | 2-Layer Sandwich | Enolase-like | domain 1 | CATH (4.3.0) |
| A | 3.90.1170.50 | Alpha Beta | Alpha-Beta Complex | Aldehyde Oxidoreductase | domain 3 | CATH (4.3.0) |
| A | 3.30.365.10 | Alpha Beta | 2-Layer Sandwich | Aldehyde Oxidoreductase | domain 4 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01799 | [2Fe-2S] binding domain (Fer2_2) | [2Fe-2S] binding domain | Domain | ||
| PF00111 | 2Fe-2S iron-sulfur cluster binding domain (Fer2) | 2Fe-2S iron-sulfur cluster binding domain | Domain | ||
| PF00941 | FAD binding domain in molybdopterin dehydrogenase (FAD_binding_5) | FAD binding domain in molybdopterin dehydrogenase | Domain | ||
| PF03450 | CO dehydrogenase flavoprotein C-terminal domain (CO_deh_flav_C) | CO dehydrogenase flavoprotein C-terminal domain | Domain | ||
| PF01315 | Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain (Ald_Xan_dh_C) | Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain | Domain | ||
| PF20256 | Molybdopterin cofactor-binding domain (MoCoBD_2) | Molybdopterin cofactor-binding domain | Domain | ||
| PF02738 | Molybdopterin cofactor-binding domain (MoCoBD_1) | Molybdopterin cofactor-binding domain | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Putative oxidoreductase iron-sulfur subunit | - | - | ||
| Putative oxidoreductase FAD-binding subunit | - | - | ||
| Putative oxidoreductase molybdopterin-binding subunit | - | - |
