4YN5 | pdb_00004yn5

Catalytic domain of Bacillus sp. JAMB-750 GH26 Endo-beta-1,4-mannanase

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d4yn5a_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	(Trans)glycosidases	beta-glycanases	Mannanase A, ManA	(Bacillus sp. JAMB750 ) [TaxId: 253629 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	beta-glycanases	8081658	4003164	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	(Trans)glycosidases	8081659	3000313	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Glyco_hydro_26	e4yn5A1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Glyco_hydro_26	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF02156	Glycosyl hydrolase family 26 (Glyco_hydro_26)	Glycosyl hydrolase family 26		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Mannan endo-1,4-beta-mannosidase	mannan endo-1,4-beta-mannosidase activity hydrolase activity, acting on glycosyl bonds beta-mannosidase activity hydrolase activity, hydrolyzing O-glycosyl compounds mannosidase activity hydrolase activity catalytic activity cellulase activity	carbohydrate metabolic process polysaccharide metabolic process substituted mannan metabolic process metabolic process cellular process primary metabolic process macromolecule metabolic process catabolic process glucan catabolic process beta-glucan metabolic process carbohydrate catabolic process macromolecule catabolic process glucan metabolic process beta-glucan catabolic process carbohydrate metabolic process polysaccharide metabolic process substituted mannan metabolic process metabolic process cellular process primary metabolic process macromolecule metabolic process catabolic process glucan catabolic process beta-glucan metabolic process carbohydrate catabolic process macromolecule catabolic process glucan metabolic process beta-glucan catabolic process polysaccharide catabolic process cellulose catabolic process cellulose metabolic process	cellular anatomical structure membrane extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR008160	Collagen triple helix repeat	Repeat
A	IPR005087	Carbohydrate binding module family 11	Domain
A	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A	IPR008979	Galactose-binding-like domain superfamily	Homologous Superfamily
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR022790	Glycosyl hydrolase family 26 domain	Domain
A	IPR015295	Carbohydrate binding module 27	Domain
A	IPR000805	Glycoside hydrolase family 26	Family
A	IPR019931	LPXTG cell wall anchor domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.