4YBV | pdb_00004ybv

Crystal Structure of mutant of (Q32A) thioesterase enzyme SAV0944 from Staphylococcus aureus subsp. aureus Mu50

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Thioesterase/thiol ester dehydrase-isomerase-like	8075192	3000149	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Thioesterase/thiol ester dehydrase-isomerase-like	8075192	3000149	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Thioesterase/thiol ester dehydrase-isomerase-like	8075192	3000149	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Thioesterase/thiol ester dehydrase-isomerase-like	8075192	3000149	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	DUF5110	e4ybvD1	A: a/b three-layered sandwiches	X: TIM beta/alpha-barrel	H: Glycoside hydrolase/deacetylase	T: Glycoside hydrolase/deacetylase	F: DUF5110	ECOD (v294.1)
C	DUF5110	e4ybvC1	A: a/b three-layered sandwiches	X: TIM beta/alpha-barrel	H: Glycoside hydrolase/deacetylase	T: Glycoside hydrolase/deacetylase	F: DUF5110	ECOD (v294.1)
B	DUF5110	e4ybvB1	A: a/b three-layered sandwiches	X: TIM beta/alpha-barrel	H: Glycoside hydrolase/deacetylase	T: Glycoside hydrolase/deacetylase	F: DUF5110	ECOD (v294.1)
A	DUF5110	e4ybvA1	A: a/b three-layered sandwiches	X: TIM beta/alpha-barrel	H: Glycoside hydrolase/deacetylase	T: Glycoside hydrolase/deacetylase	F: DUF5110	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.10.129.10	Alpha Beta	Roll	Thiol Ester Dehydrase	Chain A	CATH (4.3.0)
C	3.10.129.10	Alpha Beta	Roll	Thiol Ester Dehydrase	Chain A	CATH (4.3.0)
B	3.10.129.10	Alpha Beta	Roll	Thiol Ester Dehydrase	Chain A	CATH (4.3.0)
A	3.10.129.10	Alpha Beta	Roll	Thiol Ester Dehydrase	Chain A	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Uncharacterized protein	1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity hydrolase activity, acting on ester bonds thiolester hydrolase activity deacylase activity hydrolase activity catalytic activity acyl-CoA hydrolase activity	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR029069	HotDog domain superfamily	Homologous Superfamily
A, B, C, D	IPR006683	Thioesterase domain	Domain
A, B, C, D	IPR003736	Phenylacetic acid degradation-related domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.