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 4XR9 | pdb_00004xr9

Crystal structure of CalS8 from Micromonospora echinospora cocrystallized with NAD and TDP-glucose

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BThymidylat_synte4xr9B1 A: alpha arraysX: Four-helical up-and-down bundleH: Thymidylate synthase/dCMP hydroxymethylaseT: Thymidylate synthase/dCMP hydroxymethylaseF: Thymidylat_syntECOD (v295.2)
BRibosomal_L19e_Ce4xr9B2 A: alpha arraysX: Ribosomal protein L19 (L19e) C-terminal domainH: Ribosomal protein L19 (L19e) C-terminal domainT: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (v295.2)
ARNA_pol_Rpb2_6e4xr9A1 A: alpha arraysX: Four-helical up-and-down bundleH: Glycoside hydrolase family 127 middle domain-relatedT: Glycoside hydrolase family 127 middle domain-relatedF: RNA_pol_Rpb2_6ECOD (v295.2)
ARibosomal_L19e_Ce4xr9A2 A: alpha arraysX: Ribosomal protein L19 (L19e) C-terminal domainH: Ribosomal protein L19 (L19e) C-terminal domainT: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
A3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
CalS8 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
A, B
IPR017476UDP-glucose/GDP-mannose dehydrogenaseFamily
A, B
IPR014026UDP-glucose/GDP-mannose dehydrogenase, dimerisationDomain
A, B
IPR028359UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenaseFamily
A, B
IPR014027UDP-glucose/GDP-mannose dehydrogenase, C-terminalDomain
A, B
IPR036220UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamilyHomologous Superfamily
A, B
IPR001732UDP-glucose/GDP-mannose dehydrogenase, N-terminalDomain
A, B
IPR0089276-phosphogluconate dehydrogenase-like, C-terminal domain superfamilyHomologous Superfamily