4V6U | pdb_00004v6u

Promiscuous behavior of proteins in archaeal ribosomes revealed by cryo-EM: implications for evolution of eukaryotic ribosomes

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth AQ]SCOP2 Family40S Ribosomal protein S13, N-terminal domain-like 8050313 4006843 SCOP2 (2022-06-29)
A [auth AQ]SCOP2 Family30S Ribosomal protein S15 / 40S Ribosomal protein S13 8052954 4000767 SCOP2 (2022-06-29)
A [auth AQ]SCOP2 SuperfamilyHomeodomain-like 8052955 3000001 SCOP2 (2022-06-29)
A [auth AQ]SCOP2 SuperfamilyS15/NS1 RNA-binding domain 8052956 3001284 SCOP2 (2022-06-29)
B [auth AK]SCOP2 FamilyTranslational machinery components 8082674 4000951 SCOP2 (2022-06-29)
B [auth AK]SCOP2 SuperfamilyRibosomal protein S5 domain 2-like 8082675 3000100 SCOP2 (2022-06-29)
C [auth AI]SCOP2 FamilyRibosomal protein S8 8079066 4002027 SCOP2 (2022-06-29)
C [auth AI]SCOP2 SuperfamilyRibosomal protein S8 8079067 3000709 SCOP2 (2022-06-29)
E [auth AW]SCOP2 FamilyRibosomal protein S27e 8063781 4003887 SCOP2 (2022-06-29)
E [auth AW]SCOP2 SuperfamilyZn-binding ribosomal proteins 8063782 3001320 SCOP2 (2022-06-29)
G [auth AB]SCOP2 FamilyRibosomal protein S2-like 8063807 4003744 SCOP2 (2022-06-29)
G [auth AB]SCOP2 SuperfamilySIS domain/Ribosomal protein S2-like 8063808 3001397 SCOP2 (2022-06-29)
O [auth AE]SCOP2 FamilyCold shock DNA-binding domain-like 8048398 4001909 SCOP2 (2022-06-29)
O [auth AE]SCOP2 FamilyEukaryotic ribosomal protein S4e-like 8050322 4006847 SCOP2 (2022-06-29)
O [auth AE]SCOP2 FamilyRibosomal protein S4e, C-terminal KOW domain-like 8052751 4004197 SCOP2 (2022-06-29)
O [auth AE]SCOP2 SuperfamilyNucleic acid-binding proteins 8052753 3000135 SCOP2 (2022-06-29)
O [auth AE]SCOP2 SuperfamilyAlpha-L RNA-binding motif 8052752 3001473 SCOP2 (2022-06-29)
O [auth AE]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052754 3000334 SCOP2 (2022-06-29)
P [auth AJ]SCOP2 FamilyRibosomal protein S8e 8048705 4006189 SCOP2 (2022-06-29)
P [auth AJ]SCOP2 Superfamily50S Ribosomal protein L14-like 8053085 3000433 SCOP2 (2022-06-29)
Q [auth AO]SCOP2B SuperfamilyS13-like H2TH domain 8100260 3000053 SCOP2B (2022-06-29)
V [auth AY]SCOP2 FamilyRibosomal protein S27a 8088662 4002852 SCOP2 (2022-06-29)
V [auth AY]SCOP2 SuperfamilyZn-binding ribosomal proteins 8088663 3001320 SCOP2 (2022-06-29)
Y [auth AH]SCOP2B SuperfamilyRibosomal protein S7 8065991 3000799 SCOP2B (2022-06-29)
Z [auth AP]SCOP2 FamilyRibosomal protein S14p/S29e 8047582 4003647 SCOP2 (2022-06-29)
Z [auth AP]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052588 3000068 SCOP2 (2022-06-29)
HB [auth B6]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082571 3000210 SCOP2B (2022-06-29)
BA [auth AV]SCOP2 FamilyRibosomal protein S24e 8082570 4003636 SCOP2 (2022-06-29)
BA [auth AV]SCOP2 SuperfamilyRibosomal proteins S24e, L23 and L15e 8082571 3000210 SCOP2 (2022-06-29)
EA [auth BY]SCOP2 FamilyRibosomal protein L30p/L7e 8077496 4001360 SCOP2 (2022-06-29)
EA [auth BY]SCOP2 SuperfamilyRibosomal protein L30p/L7e 8077497 3001378 SCOP2 (2022-06-29)
FA [auth BO]SCOP2 FamilyRibosomal protein L5e and archael L18-like 8049680 4006591 SCOP2 (2022-06-29)
FA [auth BO]SCOP2 SuperfamilyTranslational machinery components 8052874 3000571 SCOP2 (2022-06-29)
GA [auth BC]SCOP2 FamilyRibosomal protein L3 8078346 4002103 SCOP2 (2022-06-29)
GA [auth BC]SCOP2 SuperfamilyTranslational proteins 8078347 3000811 SCOP2 (2022-06-29)
JA [auth Bf]SCOP2 Familyribosomal protein l39e 8100265 4001518 SCOP2 (2022-06-29)
JA [auth Bf]SCOP2 SuperfamilyRibosomal protein L39e 8100266 3001756 SCOP2 (2022-06-29)
KA [auth BU]SCOP2 FamilyRibosomal proteins L24p and L21e 8076745 4001752 SCOP2 (2022-06-29)
KA [auth BU]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076746 3000334 SCOP2 (2022-06-29)
LA [auth Bb]SCOP2 FamilyRibosomal protein L32e 8100507 4003517 SCOP2 (2022-06-29)
LA [auth Bb]SCOP2 SuperfamilyRibosomal protein L32e 8100508 3000982 SCOP2 (2022-06-29)
MA [auth Be]SCOP2 FamilyRibosomal protein L37e 8100263 4003706 SCOP2 (2022-06-29)
MA [auth Be]SCOP2 SuperfamilyZn-binding ribosomal proteins 8100264 3001320 SCOP2 (2022-06-29)
OA [auth Ba]SCOP2 FamilyRibosomal protein L31e 8100267 4001085 SCOP2 (2022-06-29)
OA [auth Ba]SCOP2 SuperfamilyRibosomal protein L31e 8100268 3000699 SCOP2 (2022-06-29)
TA [auth BA]SCOP2 FamilyRibosomal protein L1p/L10e-like 8065333 4002929 SCOP2 (2022-06-29)
TA [auth BA]SCOP2 SuperfamilyRibosomal protein L1p/L10e-like 8065334 3001911 SCOP2 (2022-06-29)
UA [auth BI]SCOP2 FamilyRibosomal protein L13 8066050 4003623 SCOP2 (2022-06-29)
UA [auth BI]SCOP2 SuperfamilyRibosomal protein L13 8066051 3001134 SCOP2 (2022-06-29)
VA [auth BR]SCOP2 FamilyRibosomal proteins L24p and L21e 8077104 4001752 SCOP2 (2022-06-29)
VA [auth BR]SCOP2 SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8077105 3000334 SCOP2 (2022-06-29)
XA [auth BQ]SCOP2 FamilyRibosomal protein L19 (L19e) 8077464 4001138 SCOP2 (2022-06-29)
XA [auth BQ]SCOP2 SuperfamilyRibosomal protein L19 (L19e) 8077465 3000890 SCOP2 (2022-06-29)
ZA [auth Bj]SCOP2 FamilyRibosomal protein L44e 8100271 4003711 SCOP2 (2022-06-29)
ZA [auth Bj]SCOP2 SuperfamilyZn-binding ribosomal proteins 8100272 3001320 SCOP2 (2022-06-29)
CB [auth BD]SCOP2 FamilyRibosomal protein L4 8077106 4003628 SCOP2 (2022-06-29)
CB [auth BD]SCOP2 SuperfamilyRibosomal protein L4 8077107 3001146 SCOP2 (2022-06-29)
IB [auth BP]SCOP2 FamilyRibosomal proteins L15p and L18e 8046511 4003555 SCOP2 (2022-06-29)
IB [auth BP]SCOP2 SuperfamilyRibosomal proteins L15p and L18e 8095969 3001045 SCOP2 (2022-06-29)
JB [auth BM]SCOP2 FamilyL15e 8082470 4000945 SCOP2 (2022-06-29)
JB [auth BM]SCOP2 SuperfamilyRibosomal proteins S24e, L23 and L15e 8082471 3000210 SCOP2 (2022-06-29)
KB [auth BS]SCOP2 FamilyRibosomal protein L22 8076699 4001212 SCOP2 (2022-06-29)
KB [auth BS]SCOP2 SuperfamilyRibosomal protein L22 8076700 3001078 SCOP2 (2022-06-29)
MB [auth BN]SCOP2 FamilyRibosomal protein L10e 8079408 4001135 SCOP2 (2022-06-29)
MB [auth BN]SCOP2 SuperfamilyRibosomal protein L16p/L10e 8079409 3000884 SCOP2 (2022-06-29)
QB [auth BJ]SCOP2 FamilyRibosomal protein L14 8072037 4001826 SCOP2 (2022-06-29)
QB [auth BJ]SCOP2 Superfamily50S Ribosomal protein L14-like 8072038 3000433 SCOP2 (2022-06-29)
RB [auth Bl]SCOP2 FamilyRplX-like 8100269 4002003 SCOP2 (2022-06-29)
RB [auth Bl]SCOP2 SuperfamilyRplX-like 8100270 3000673 SCOP2 (2022-06-29)
PB [auth Bc]SCOP2B SuperfamilyTranslational proteins 8042350 3000811 SCOP2B (2022-06-29)
LB [auth Bd]SCOP2 FamilyRibosomal protein L34e-like 8048725 4006193 SCOP2 (2022-06-29)
LB [auth Bd]SCOP2 SuperfamilyRibosomal protein L34e-like 8053545 3002203 SCOP2 (2022-06-29)
GB [auth BZ]SCOP2 FamilyL30e/L7ae ribosomal proteins 8063967 4001513 SCOP2 (2022-06-29)
GB [auth BZ]SCOP2 SuperfamilyL30e-like 8063968 3001739 SCOP2 (2022-06-29)
SA [auth Bi]SCOP2 FamilyRibosomal protein L37ae 8100255 4003704 SCOP2 (2022-06-29)
SA [auth Bi]SCOP2 SuperfamilyZn-binding ribosomal proteins 8100256 3001320 SCOP2 (2022-06-29)
RA [auth BW]SCOP2 FamilyRibosomal protein L29 (L29p) 8076739 4000600 SCOP2 (2022-06-29)
RA [auth BW]SCOP2 SuperfamilyRibosomal protein L29 (L29p) 8076740 3000713 SCOP2 (2022-06-29)
PA [auth BT]SCOP2 FamilyL23p 8077076 4000943 SCOP2 (2022-06-29)
PA [auth BT]SCOP2 SuperfamilyRibosomal proteins S24e, L23 and L15e 8077077 3000210 SCOP2 (2022-06-29)
NA [auth BE]SCOP2 FamilyRibosomal protein L5 8077500 4001498 SCOP2 (2022-06-29)
NA [auth BE]SCOP2 SuperfamilyRL5-like 8077501 3001709 SCOP2 (2022-06-29)
D [auth AG]SCOP2 FamilyRibosomal protein S6e 8048559 4006143 SCOP2 (2022-06-29)
D [auth AG]SCOP2 SuperfamilyGS N-terminal domain-like 8053162 3000408 SCOP2 (2022-06-29)
IA [auth BL]SCOP2 FamilyRibosomal proteins L15p and L18e 8077120 4003555 SCOP2 (2022-06-29)
IA [auth BL]SCOP2 SuperfamilyRibosomal proteins L15p and L18e 8077121 3001045 SCOP2 (2022-06-29)
CA [auth AL]SCOP2B SuperfamilyRibosomal protein S10 8098822 3001336 SCOP2B (2022-06-29)
X [auth AA]SCOP2 FamilyRibosomal S3Ae 8048445 4006095 SCOP2 (2022-06-29)
X [auth AA]SCOP2 SuperfamilyRibosomal S3Ae-like 8053209 3002166 SCOP2 (2022-06-29)
BB [auth BG]SCOP2B SuperfamilyL30e-like 8033057 3001739 SCOP2B (2022-06-29)
OB [auth B4]SCOP2B SuperfamilyL30e-like 8033057 3001739 SCOP2B (2022-06-29)
T [auth A3]SCOP2B SuperfamilyL30e-like 8033057 3001739 SCOP2B (2022-06-29)
S [auth AS]SCOP2 FamilyRps17e-like 8063509 4002889 SCOP2 (2022-06-29)
S [auth AS]SCOP2 SuperfamilyRps17e-like 8063510 3001852 SCOP2 (2022-06-29)
N [auth AM]SCOP2 FamilyRibosomal protein L18p and S11 8100261 4000555 SCOP2 (2022-06-29)
N [auth AM]SCOP2 SuperfamilyTranslational machinery components 8100262 3000571 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth AQ]TTL, ATPgrasp_YheCDe4v6uAQ1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
B [auth AK]Ribosomal_S17,Ribosomal_S17_Ne4v6uAK1 A: alpha bundlesX: OB-foldH: Nucleic acid-binding proteinT: Nucleic acid-binding proteinF: Ribosomal_S17,Ribosomal_S17_NECOD (develop294)
C [auth AI]TTL, ATPgrasp_YheCDe4v6uAI1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
E [auth AW]TTL, ATPgrasp_YheCDe4v6uAW1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
F [auth AC]TTL, ATPgrasp_YheCDe4v6uAC1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
G [auth AB]FlaF_Ig-likee4v6uAB1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: FlaF_Ig-likeECOD (develop294)
H [auth AR]Cellulasee4v6uAR1 A: alpha bundlesX: HAD domain-likeH: HAD domain-relatedT: PIN domain-likeF: CellulaseECOD (develop294)
L [auth AN]TTL, ATPgrasp_YheCDe4v6uAN1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
M [auth AX]TTL, ATPgrasp_YheCDe4v6uAX1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
O [auth AE]TTL, ATPgrasp_YheCDe4v6uAE1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
P [auth AJ]TTL, ATPgrasp_YheCDe4v6uAJ1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
Q [auth AO]Cellulasee4v6uAO1 A: alpha bundlesX: HAD domain-likeH: HAD domain-relatedT: PIN domain-likeF: CellulaseECOD (develop294)
R [auth AF]KAsynt_C_assoce4v6uAF2 A: alpha bundlesX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: Type II ABC importer transmembrane domain foldF: KAsynt_C_assocECOD (develop294)
R [auth AF]AAA_16e4v6uAF3 A: alpha bundlesX: TIM beta/alpha-barrelH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: AAA_16ECOD (develop294)
V [auth AY]TTL, ATPgrasp_YheCDe4v6uAY1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
W [auth AT]Ribosomal_S17,Ribosomal_S17_Ne4v6uAT1 A: alpha bundlesX: OB-foldH: Nucleic acid-binding proteinT: Nucleic acid-binding proteinF: Ribosomal_S17,Ribosomal_S17_NECOD (develop294)
Y [auth AH]TTL, ATPgrasp_YheCDe4v6uAH1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
Z [auth AP]TTL, ATPgrasp_YheCDe4v6uAP1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
HB [auth B6]TTL, ATPgrasp_YheCDe4v6uB61 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
BA [auth AV]TTL, ATPgrasp_YheCDe4v6uAV1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
DA [auth AU]TTL, ATPgrasp_YheCDe4v6uAU1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
EA [auth BY]TTL, ATPgrasp_YheCDe4v6uBY1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
FA [auth BO]TTL, ATPgrasp_YheCDe4v6uBO1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
GA [auth BC]TTL, ATPgrasp_YheCDe4v6uBC1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
HA [auth B5]TTL, ATPgrasp_YheCDe4v6uB51 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
WA [auth BK]TTL, ATPgrasp_YheCDe4v6uBK1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
JA [auth Bf]TTL, ATPgrasp_YheCDe4v6uBf1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
KA [auth BU]TTL, ATPgrasp_YheCDe4v6uBU1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
LA [auth Bb]TTL, ATPgrasp_YheCDe4v6uBb1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
MA [auth Be]TTL, ATPgrasp_YheCDe4v6uBe1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
OA [auth Ba]TTL, ATPgrasp_YheCDe4v6uBa1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
QA [auth Bk]TTL, ATPgrasp_YheCDe4v6uBk1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
TA [auth BA]TTL, ATPgrasp_YheCDe4v6uBA1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
UA [auth BI]TTL, ATPgrasp_YheCDe4v6uBI1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
VA [auth BR]TTL, ATPgrasp_YheCDe4v6uBR1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
XA [auth BQ]TTL, ATPgrasp_YheCDe4v6uBQ1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
ZA [auth Bj]TTL, ATPgrasp_YheCDe4v6uBj1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
AB [auth BB]TTL, ATPgrasp_YheCDe4v6uBB1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
CB [auth BD]TTL, ATPgrasp_YheCDe4v6uBD1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
DB [auth BF]TTL, ATPgrasp_YheCDe4v6uBF1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
EB [auth Bh]PPR_1, PPR_2, PPR_long, TPR_24e4v6uBh1 A: alpha bundlesX: FormyltransferaseH: FormyltransferaseT: FormyltransferaseF: PPR_1, PPR_2, PPR_long, TPR_24ECOD (develop294)
IB [auth BP]TTL, ATPgrasp_YheCDe4v6uBP1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
JB [auth BM]TTL, ATPgrasp_YheCDe4v6uBM1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
KB [auth BS]TTL, ATPgrasp_YheCDe4v6uBS1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
MB [auth BN]PemK_toxine4v6uBN1 A: alpha bundlesX: SH3H: SH3T: SH3F: PemK_toxinECOD (develop294)
NB [auth Bg]TTL, ATPgrasp_YheCDe4v6uBg1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
QB [auth BJ]TTL, ATPgrasp_YheCDe4v6uBJ1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
RB [auth Bl]TTL, ATPgrasp_YheCDe4v6uBl1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
PB [auth Bc]TTL, ATPgrasp_YheCDe4v6uBc1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
LB [auth Bd]V_ATPase_Ie4v6uBd1 A: alpha bundlesX: Alpha-beta plaitsH: Pseudouridine synthaseT: Pseudouridine synthaseF: V_ATPase_IECOD (develop294)
GB [auth BZ]TTL, ATPgrasp_YheCDe4v6uBZ1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
FB [auth BH]TTL, ATPgrasp_YheCDe4v6uBH1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
YA [auth BV]TTL, ATPgrasp_YheCDe4v6uBV1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
SA [auth Bi]TTL, ATPgrasp_YheCDe4v6uBi1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
RA [auth BW]TTL, ATPgrasp_YheCDe4v6uBW1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
PA [auth BT]TTL, ATPgrasp_YheCDe4v6uBT1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
NA [auth BE]TTL, ATPgrasp_YheCDe4v6uBE1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
D [auth AG]TTL, ATPgrasp_YheCDe4v6uAG1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
IA [auth BL]TTL, ATPgrasp_YheCDe4v6uBL1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
CA [auth AL]TTL, ATPgrasp_YheCDe4v6uAL1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
X [auth AA]TTL, ATPgrasp_YheCDe4v6uAA1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
BB [auth BG]TTL, ATPgrasp_YheCDe4v6uBG1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
OB [auth B4]TTL, ATPgrasp_YheCDe4v6uB41 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
T [auth A3]TTL, ATPgrasp_YheCDe4v6uA31 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
S [auth AS]TTL, ATPgrasp_YheCDe4v6uAS1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
N [auth AM]TTL, ATPgrasp_YheCDe4v6uAM1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: TTL, ATPgrasp_YheCDECOD (develop294)
J [auth AD]KAsynt_C_assoce4v6uAD1 A: alpha bundlesX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: Type II ABC importer transmembrane domain foldF: KAsynt_C_assocECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth AQ]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1]. Domain
A [auth AQ]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
B [auth AK]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
C [auth AI]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
E [auth AW]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
F [auth AC]PF07650KH domain (KH_2)KH domainDomain
F [auth AC]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
G [auth AB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
H [auth AR]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
L [auth AN]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
M [auth AX]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28eDomain
O [auth AE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
O [auth AE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
O [auth AE]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
P [auth AJ]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
Q [auth AO]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
R [auth AF]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
R [auth AF]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
V [auth AY]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
W [auth AT]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
Y [auth AH]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
Z [auth AP]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
BA [auth AV],
HB [auth B6]		PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
DA [auth AU]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
EA [auth BY]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
FA [auth BO]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
GA [auth BC]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
GA [auth BC]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
HA [auth B5],
WA [auth BK]		PF00467KOW motif (KOW)KOW motif- Family
KA [auth BU]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
KA [auth BU]PF00467KOW motif (KOW)KOW motif- Family
TA [auth BA]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
TA [auth BA]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10. Domain
UA [auth BI]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
XA [auth BQ]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
XA [auth BQ]PF25476Ribosomal protein L19e, C-terminal domain (Ribosomal_L19e_C)Ribosomal protein L19e, C-terminal domainThis domain is found at the C-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
AB [auth BB]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
AB [auth BB]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
AB [auth BB]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
CB [auth BD]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
CB [auth BD]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
DB [auth BF]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
DB [auth BF]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
IB [auth BP]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
JB [auth BM]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
KB [auth BS]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
MB [auth BN]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
QB [auth BJ]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
QB [auth BJ]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
GB [auth BZ]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
FB [auth BH]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
FB [auth BH]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
YA [auth BV]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
RA [auth BW]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
PA [auth BT]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
NA [auth BE]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
NA [auth BE]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
NA [auth BE]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
D [auth AG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
IA [auth BL]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
IA [auth BL]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
CA [auth AL]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
BB [auth BG],
OB [auth B4],
T [auth A3]		PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
S [auth AS]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
N [auth AM]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
J [auth AD]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth AQ]30S ribosomal protein S15P/S13e
B [auth AK]30S ribosomal protein S9P
C [auth AI]30S ribosomal protein S8P
E [auth AW]30S ribosomal protein S27e
F [auth AC]30S ribosomal protein S3P
G [auth AB]30S ribosomal protein S2P
H [auth AR]30S ribosomal protein S17P
I [auth A9]unknown 30S ribosomal protein SX---
K [auth A1]E-tRNA---
L [auth AN]30S ribosomal protein S12P
M [auth AX]30S ribosomal protein S28e
O [auth AE]30S ribosomal protein S4e
P [auth AJ]30S ribosomal protein S8e
Q [auth AO]30S ribosomal protein S13P
R [auth AF]30S ribosomal protein S5P
U [auth A2]16S rRNA---
V [auth AY]30S ribosomal protein S27ae
W [auth AT]30S ribosomal protein S19P
Y [auth AH]30S ribosomal protein S7P
Z [auth AP]30S ribosomal protein S14P type Z
AA [auth A0]P-tRNA---
BA [auth AV],
HB [auth B6]		30S ribosomal protein S24e
DA [auth AU]SSU ribosomal protein S19E
EA [auth BY]50S ribosomal protein L30P
FA [auth BO]50S ribosomal protein L18P
GA [auth BC]50S ribosomal protein L3P
HA [auth B5],
WA [auth BK]		50S ribosomal protein L14e
JA [auth Bf]50S ribosomal protein L39e
KA [auth BU]50S ribosomal protein L24P
LA [auth Bb]50S ribosomal protein L32e
MA [auth Be]50S ribosomal protein L37e
OA [auth Ba]50S ribosomal protein L31e
QA [auth Bk]Acidic ribosomal protein P0 homolog
TA [auth BA]50S ribosomal protein L1P
UA [auth BI]50S ribosomal protein L13P
VA [auth BR]50S ribosomal protein L21e
XA [auth BQ]50S ribosomal protein L19e
ZA [auth Bj]50S ribosomal protein L44E
AB [auth BB]50S ribosomal protein L2P
CB [auth BD]50S ribosomal protein L4P
DB [auth BF]50S ribosomal protein L6P
EB [auth Bh]50S ribosomal protein L41e- -
IB [auth BP]50S ribosomal protein L18e
JB [auth BM]50S ribosomal protein L15e
KB [auth BS]50S ribosomal protein L22P
MB [auth BN]50S ribosomal protein L10e
NB [auth Bg]50S ribosomal protein L40e
QB [auth BJ]50S ribosomal protein L14P
RB [auth Bl]50S ribosomal protein LX
TB [auth B3]5S rRNA---
SB [auth B1]23S rRNA---
PB [auth Bc]50S ribosomal protein L35Ae
LB [auth Bd]50S ribosomal protein L34e
GB [auth BZ]50S ribosomal protein L30e
FB [auth BH]50S ribosomal protein L11P
YA [auth BV]50S ribosomal protein L24e
SA [auth Bi]50S ribosomal protein L37Ae
RA [auth BW]50S ribosomal protein L29P
PA [auth BT]50S ribosomal protein L23P
NA [auth BE]50S ribosomal protein L5P
D [auth AG]30S ribosomal protein S6e
IA [auth BL]50S ribosomal protein L15P
CA [auth AL]30S ribosomal protein S10P
X [auth AA]30S ribosomal protein S3Ae
BB [auth BG],
OB [auth B4],
T [auth A3]		50S ribosomal protein L7Ae
S [auth AS]30S ribosomal protein S17e
N [auth AM]30S ribosomal protein S11P
J [auth AD]30S ribosomal protein S4P

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth AQ]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
A [auth AQ]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
A [auth AQ]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
A [auth AQ]IPR000589Small ribosomal subunit protein uS15Family
B [auth AK]IPR019958Small ribosomal subunit protein uS9, archaeaFamily
B [auth AK]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
B [auth AK]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
B [auth AK]IPR000754Small ribosomal subunit protein uS9Family
B [auth AK]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
C [auth AI]IPR000630Small ribosomal subunit protein uS8Family
C [auth AI]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
C [auth AI]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
E [auth AW]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
E [auth AW]IPR000592Small ribosomal subunit protein eS27Family
E [auth AW]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
F [auth AC]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
F [auth AC]IPR027488Small ribosomal subunit protein uS3, archaeaFamily
F [auth AC]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
F [auth AC]IPR057258Small ribosomal subunit protein uS3Family
F [auth AC]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
F [auth AC]IPR004087K Homology domainDomain
F [auth AC]IPR004044K Homology domain, type 2Domain
F [auth AC]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
F [auth AC]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
G [auth AB]IPR023454Small ribosomal subunit protein uS2, archaeaFamily
G [auth AB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
G [auth AB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
G [auth AB]IPR001865Small ribosomal subunit protein uS2Family
G [auth AB]IPR005707Small ribosomal subunit protein uS2, eukaryota/archaeaFamily
H [auth AR]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
H [auth AR]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
H [auth AR]IPR000266Small ribosomal subunit protein uS17Family
H [auth AR]IPR019978Small ribosomal subunit protein uS17, archaealFamily
H [auth AR]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
L [auth AN]IPR006032Small ribosomal subunit protein uS12Family
L [auth AN]IPR022863Ribosomal protein uS12, archaeaFamily
L [auth AN]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
L [auth AN]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
M [auth AX]IPR028626Ribosomal protein eS28 conserved siteConserved Site
M [auth AX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
M [auth AX]IPR000289Small ribosomal subunit protein eS28Family
O [auth AE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
O [auth AE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
O [auth AE]IPR002942RNA-binding S4 domainDomain
O [auth AE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
O [auth AE]IPR000876Small ribosomal subunit protein eS4Family
O [auth AE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
O [auth AE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
O [auth AE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
O [auth AE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
O [auth AE]IPR005824KOWDomain
P [auth AJ]IPR001047Small ribosomal subunit protein eS8Family
P [auth AJ]IPR020919Small ribosomal subunit protein eS8, archaeaFamily
P [auth AJ]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
P [auth AJ]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
Q [auth AO]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
Q [auth AO]IPR001892Small ribosomal subunit protein uS13Family
Q [auth AO]IPR019977Small ribosomal subunit protein uS13, archaeaFamily
Q [auth AO]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
Q [auth AO]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
R [auth AF]IPR005711Small ribosomal subunit protein uS5, eukaryota_archaeaFamily
R [auth AF]IPR000851Small ribosomal subunit protein uS5Family
R [auth AF]IPR047866Small ribosomal subunit protein uS5, archaeaFamily
R [auth AF]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
R [auth AF]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
R [auth AF]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
R [auth AF]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
R [auth AF]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
V [auth AY]IPR002906Small ribosomal subunit protein eS31Domain
V [auth AY]IPR022845Small ribosomal subunit protein eS31, archaeaFamily
V [auth AY]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
W [auth AT]IPR002222Small ribosomal subunit protein uS19Family
W [auth AT]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
W [auth AT]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
W [auth AT]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
Y [auth AH]IPR000235Small ribosomal subunit protein uS7Family
Y [auth AH]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
Y [auth AH]IPR026018Small ribosomal subunit protein uS7, archaeaFamily
Y [auth AH]IPR023798Small ribosomal subunit protein uS7 domainDomain
Y [auth AH]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
Z [auth AP]IPR001209Small ribosomal subunit protein uS14Family
Z [auth AP]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
Z [auth AP]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
Z [auth AP]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
Z [auth AP]IPR023676Small ribosomal subunit protein uS14, archaeaFamily
BA [auth AV],
HB [auth B6]		IPR001976Small ribosomal subunit protein eS24Family
BA [auth AV],
HB [auth B6]		IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
BA [auth AV],
HB [auth B6]		IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
BA [auth AV],
HB [auth B6]		IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
DA [auth AU]IPR001266Small ribosomal subunit protein eS19Family
DA [auth AU]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
DA [auth AU]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
DA [auth AU]IPR027548Small ribosomal subunit protein eS19, archaeaFamily
DA [auth AU]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
EA [auth BY]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
EA [auth BY]IPR039699Large ribosomal subunit protein uL30Family
EA [auth BY]IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
EA [auth BY]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
EA [auth BY]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
EA [auth BY]IPR005997Large ribosomal subunit protein uL30, archaeaFamily
FA [auth BO]IPR057268Large ribosomal subunit protein uL18Family
FA [auth BO]IPR057267Large ribosomal subunit protein uL18, archaeaFamily
FA [auth BO]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
GA [auth BC]IPR019928Large ribosomal subunit protein uL3, archaeaFamily
GA [auth BC]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
GA [auth BC]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
GA [auth BC]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
GA [auth BC]IPR000597Large ribosomal subunit protein uL3Family
GA [auth BC]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
HA [auth B5],
WA [auth BK]		IPR039660Large ribosomal subunit protein eL14Family
HA [auth B5],
WA [auth BK]		IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
HA [auth B5],
WA [auth BK]		IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
HA [auth B5],
WA [auth BK]		IPR005824KOWDomain
HA [auth B5],
WA [auth BK]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
HA [auth B5],
WA [auth BK]		IPR023651Large ribosomal subunit protein eL14, archaeaFamily
JA [auth Bf]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
JA [auth Bf]IPR000077Large ribosomal subunit protein eL39Family
JA [auth Bf]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
KA [auth BU]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
KA [auth BU]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
KA [auth BU]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
KA [auth BU]IPR005824KOWDomain
KA [auth BU]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
KA [auth BU]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
LA [auth Bb]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
LA [auth Bb]IPR023654Large ribosomal subunit protein eL32, archaeaFamily
LA [auth Bb]IPR001515Large ribosomal subunit protein eL32Family
LA [auth Bb]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
MA [auth Be]IPR001569Large ribosomal subunit protein eL37Family
MA [auth Be]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
MA [auth Be]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MA [auth Be]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
OA [auth Ba]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
OA [auth Ba]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
OA [auth Ba]IPR000054Large ribosomal subunit protein eL31Family
QA [auth Bk]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
QA [auth Bk]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
QA [auth Bk]IPR050323Universal ribosomal protein uL10Family
QA [auth Bk]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
QA [auth Bk]IPR001790Large ribosomal subunit protein uL10, N-terminalDomain
QA [auth Bk]IPR022909Large ribosomal subunit protein uL10, archaeaFamily
TA [auth BA]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
TA [auth BA]IPR023669Large ribosomal subunit protein uL1, archaeaFamily
TA [auth BA]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
TA [auth BA]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
TA [auth BA]IPR002143Large ribosomal subunit protein uL1Family
TA [auth BA]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
UA [auth BI]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
UA [auth BI]IPR005822Large ribosomal subunit protein uL13Family
UA [auth BI]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
UA [auth BI]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
UA [auth BI]IPR005755Large ribosomal subunit protein uL13, eukaryota/archaeaFamily
VA [auth BR]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
VA [auth BR]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
VA [auth BR]IPR022856Large ribosomal subunit protein eL21, archaeaFamily
VA [auth BR]IPR001147Large ribosomal subunit protein eL21Family
VA [auth BR]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
XA [auth BQ]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
XA [auth BQ]IPR057259Ribosomal protein L19e, N-terminal domainDomain
XA [auth BQ]IPR039547Large ribosomal subunit protein eL19Family
XA [auth BQ]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
XA [auth BQ]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
XA [auth BQ]IPR057260Ribosomal protein L19e, C-terminal domainDomain
XA [auth BQ]IPR000196Large ribosomal subunit protein eL19 domainDomain
XA [auth BQ]IPR033936Large ribosomal subunit protein eL19, archaeaDomain
ZA [auth Bj]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
ZA [auth Bj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
ZA [auth Bj]IPR000552Large ribosomal subunit protein eL42Family
AB [auth BB]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
AB [auth BB]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
AB [auth BB]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
AB [auth BB]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AB [auth BB]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
AB [auth BB]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AB [auth BB]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
AB [auth BB]IPR002171Large ribosomal subunit protein uL2Family
CB [auth BD]IPR019970Large ribosomal subunit protein uL4, archaeaFamily
CB [auth BD]IPR002136Large ribosomal subunit protein uL4Family
CB [auth BD]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
CB [auth BD]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
CB [auth BD]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
DB [auth BF]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
DB [auth BF]IPR019907Large ribosomal subunit protein uL6, archaeaFamily
DB [auth BF]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
DB [auth BF]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
DB [auth BF]IPR000702Large ribosomal subunit protein uL6-likeFamily
IB [auth BP]IPR022947Large ribosomal subunit protein eL18, archaeaFamily
IB [auth BP]IPR021131Large ribosomal subunit protein uL15/eL18Domain
IB [auth BP]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
IB [auth BP]IPR000039Large ribosomal subunit protein eL18Family
IB [auth BP]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
JB [auth BM]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
JB [auth BM]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
JB [auth BM]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
JB [auth BM]IPR020926Large ribosomal subunit protein eL15, archaealFamily
JB [auth BM]IPR000439Large ribosomal subunit protein eL15Family
KB [auth BS]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
KB [auth BS]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
KB [auth BS]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
KB [auth BS]IPR001063Large ribosomal subunit protein uL22Family
KB [auth BS]IPR057265Large ribosomal subunit protein uL22, archaeaFamily
MB [auth BN]IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
MB [auth BN]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
MB [auth BN]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
MB [auth BN]IPR022981Large ribosomal subunit protein uL16, archaeaFamily
MB [auth BN]IPR016180Large ribosomal subunit protein uL16 domainDomain
MB [auth BN]IPR047873Large ribosomal subunit protein uL16Family
NB [auth Bg]IPR023657Large ribosomal subunit protein eL40, archaeaFamily
NB [auth Bg]IPR001975Large ribosomal subunit protein eL40 domainDomain
NB [auth Bg]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
NB [auth Bg]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
QB [auth BJ]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
QB [auth BJ]IPR000218Large ribosomal subunit protein uL14Family
QB [auth BJ]IPR019971Large ribosomal subunit protein uL14, archaeaFamily
QB [auth BJ]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
RB [auth Bl]IPR028877Large ribosomal subunit protein eL20Family
RB [auth Bl]IPR023573Large ribosomal subunit protein eL20 domainDomain
PB [auth Bc]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
PB [auth Bc]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
PB [auth Bc]IPR001780Large ribosomal subunit protein eL33Family
PB [auth Bc]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
LB [auth Bd]IPR008195Large ribosomal subunit protein eL34Family
LB [auth Bd]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
LB [auth Bd]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
LB [auth Bd]IPR047868Large ribosomal subunit protein eL34, eukaryota/archaeaFamily
GB [auth BZ]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
GB [auth BZ]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
GB [auth BZ]IPR000231Large ribosomal subunit protein eL30Family
GB [auth BZ]IPR039109Large ribosomal subunit protein eL30-likeFamily
GB [auth BZ]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
FB [auth BH]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
FB [auth BH]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
FB [auth BH]IPR000911Ribosomal protein uL11Family
FB [auth BH]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
FB [auth BH]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
FB [auth BH]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
YA [auth BV]IPR011017TRASH domainDomain
YA [auth BV]IPR056366Large ribosomal subunit protein eL24Family
YA [auth BV]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
YA [auth BV]IPR055345Large ribosomal subunit protein eL24-like, archaeaFamily
YA [auth BV]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
YA [auth BV]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
SA [auth Bi]IPR002674Large ribosomal subunit protein eL43Family
SA [auth Bi]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
SA [auth Bi]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
SA [auth Bi]IPR050522Eukaryotic ribosomal protein eL43Family
RA [auth BW]IPR001854Large ribosomal subunit protein uL29Family
RA [auth BW]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
RA [auth BW]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
PA [auth BT]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
PA [auth BT]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
PA [auth BT]IPR019985Large ribosomal subunit protein uL23Family
PA [auth BT]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
PA [auth BT]IPR013025Large ribosomal subunit protein uL23-likeFamily
NA [auth BE]IPR057266Large ribosomal subunit protein uL5, eukaryota/archaeaFamily
NA [auth BE]IPR022804Large ribosomal subunit protein uL5, archaeaFamily
NA [auth BE]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
NA [auth BE]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
NA [auth BE]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
NA [auth BE]IPR002132Large ribosomal subunit protein uL5Family
D [auth AG]IPR001377Small ribosomal subunit protein eS6Family
D [auth AG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
D [auth AG]IPR020924Small ribosomal subunit protein eS6, archaeaFamily
IA [auth BL]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
IA [auth BL]IPR021131Large ribosomal subunit protein uL15/eL18Domain
IA [auth BL]IPR030878Large ribosomal subunit protein uL15Family
IA [auth BL]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
IA [auth BL]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
CA [auth AL]IPR001848Small ribosomal subunit protein uS10Family
CA [auth AL]IPR027486Small ribosomal subunit protein uS10 domainDomain
CA [auth AL]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
CA [auth AL]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
CA [auth AL]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
X [auth AA]IPR001593Small ribosomal subunit protein eS1Family
X [auth AA]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
X [auth AA]IPR030838Small ribosomal subunit protein eS1, archaeaFamily
BB [auth BG],
OB [auth B4],
T [auth A3]		IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
BB [auth BG],
OB [auth B4],
T [auth A3]		IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
BB [auth BG],
OB [auth B4],
T [auth A3]		IPR022481Large ribosomal subunit protein eL8, archaeaFamily
BB [auth BG],
OB [auth B4],
T [auth A3]		IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
BB [auth BG],
OB [auth B4],
T [auth A3]		IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
BB [auth BG],
OB [auth B4],
T [auth A3]		IPR018492Ribosomal protein eL8/Nhp2 familyFamily
S [auth AS]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
S [auth AS]IPR001210Small ribosomal subunit protein eS17Family
S [auth AS]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
N [auth AM]IPR019961Small ribosomal subunit protein uS11, archaeaFamily
N [auth AM]IPR001971Small ribosomal subunit protein uS11Family
N [auth AM]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
N [auth AM]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
J [auth AD]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
J [auth AD]IPR002942RNA-binding S4 domainDomain
J [auth AD]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
J [auth AD]IPR022802Small ribosomal subunit protein uS4, archaeaFamily
J [auth AD]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
J [auth AD]IPR022801Small ribosomal subunit protein uS4Family
J [auth AD]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily