4V6I

Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
K [auth AJ]SCOP2 FamilyRibosomal protein S108098647 4001240 SCOP2 (2022-06-29)
K [auth AJ]SCOP2 SuperfamilyRibosomal protein S108098648 3001336 SCOP2 (2022-06-29)
L [auth AK]SCOP2B SuperfamilyTranslational machinery components8095805 3000571 SCOP2B (2022-06-29)
N [auth AM]SCOP2 FamilyRibosomal protein S138102872 4000260 SCOP2 (2022-06-29)
N [auth AM]SCOP2 SuperfamilyS13-like H2TH domain8102873 3000053 SCOP2 (2022-06-29)
O [auth AN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052569 3000068 SCOP2B (2022-06-29)
P [auth AO]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8052974 3001284 SCOP2B (2022-06-29)
P [auth AO]SCOP2B SuperfamilyHomeodomain-like8052973 3000001 SCOP2B (2022-06-29)
S [auth AR]SCOP2B SuperfamilyRibosomal protein S198086076 3000686 SCOP2B (2022-06-29)
B [auth AA]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8061280 3001397 SCOP2B (2022-06-29)
U [auth AT]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8053136 3000068 SCOP2B (2022-06-29)
V [auth AV]SCOP2 FamilyRibosomal protein S25-like8051322 4007308 SCOP2 (2022-06-29)
V [auth AV]SCOP2 SuperfamilyWinged helix DNA-binding domain8059235 3000034 SCOP2 (2022-06-29)
Y [auth AY]SCOP2 FamilyCold shock DNA-binding domain-like8063429 4001909 SCOP2 (2022-06-29)
Y [auth AY]SCOP2 SuperfamilyNucleic acid-binding proteins8063430 3000135 SCOP2 (2022-06-29)
Z [auth AZ]SCOP2 FamilyRibosomal protein S30e-like8105783 4005067 SCOP2 (2022-06-29)
Z [auth AZ]SCOP2 SuperfamilyRibosomal protein S30e-like8105784 3002190 SCOP2 (2022-06-29)
FA [auth BC]SCOP2B SuperfamilyTranslational proteins8078363 3000811 SCOP2B (2022-06-29)
GA [auth BD]SCOP2B SuperfamilyRibosomal protein L48052816 3001146 SCOP2B (2022-06-29)
HA [auth BE]SCOP2 FamilyRibosomal protein L58073883 4001498 SCOP2 (2022-06-29)
HA [auth BE]SCOP2 SuperfamilyRL5-like8073884 3001709 SCOP2 (2022-06-29)
IA [auth BG]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053109 3000334 SCOP2B (2022-06-29)
KA [auth BH]SCOP2B SuperfamilyL30e-like8063962 3001739 SCOP2B (2022-06-29)
NA [auth BK]SCOP2B SuperfamilyRibosomal protein L138066053 3001134 SCOP2B (2022-06-29)
QA [auth BP]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8082481 3000210 SCOP2B (2022-06-29)
RA [auth BO]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8077127 3001045 SCOP2B (2022-06-29)
VA [auth BW]SCOP2B Superfamily60S Ribosomal protein L22e8053058 3002158 SCOP2B (2022-06-29)
WA [auth BV]SCOP2B SuperfamilyRibosomal protein L228076708 3001078 SCOP2B (2022-06-29)
XA [auth BX]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095962 3000210 SCOP2B (2022-06-29)
ZA [auth BY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076760 3000334 SCOP2B (2022-06-29)
AB [auth Ba]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053046 3000334 SCOP2B (2022-06-29)
DB [auth Bf]SCOP2B SuperfamilyL30e-like8039862 3001739 SCOP2B (2022-06-29)
EB [auth Be]SCOP2B SuperfamilyRibosomal protein L30p/L7e8052917 3001378 SCOP2B (2022-06-29)
EB [auth Be]SCOP2B SuperfamilyRibosomal L30p/L7e protein N-terminal domain-lke8052916 3002152 SCOP2B (2022-06-29)
HB [auth Bi]SCOP2B SuperfamilyRibosomal protein L34e-like8053547 3002203 SCOP2B (2022-06-29)
IB [auth Bj]SCOP2B SuperfamilyTranslational proteins8087451 3000811 SCOP2B (2022-06-29)
JB [auth Bk]SCOP2B SuperfamilyRibosomal protein L36e8053115 3002161 SCOP2B (2022-06-29)
LB [auth Bl]SCOP2B SuperfamilyZn-binding ribosomal proteins8080044 3001320 SCOP2B (2022-06-29)
MB [auth Bn]SCOP2B SuperfamilyRibosomal L38e protein-like8053562 3002206 SCOP2B (2022-06-29)
NB [auth Bo]SCOP2B SuperfamilyRibosomal protein L39e8078549 3001756 SCOP2B (2022-06-29)
YB [auth BQ]SCOP2B SuperfamilyTranslational machinery components8052875 3000571 SCOP2B (2022-06-29)
BC [auth BI]SCOP2 FamilyRibosomal protein L10e8079406 4001135 SCOP2 (2022-06-29)
BC [auth BI]SCOP2 SuperfamilyRibosomal protein L16p/L10e8079407 3000884 SCOP2 (2022-06-29)
H [auth AF]SCOP2B SuperfamilyRibosomal protein S78065993 3000799 SCOP2B (2022-06-29)
I [auth AH]SCOP2B SuperfamilyRibosomal protein S88096922 3000709 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth Aa]ANAPC4_WD40_2e4v6iAa1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: ANAPC4_WD40_2ECOD (1.6)
J [auth AI]Ribosomal_S9e4v6iAI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
K [auth AJ]Ribosomal_S10_1e4v6iAJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
L [auth AK]Ribosomal_S11e4v6iAK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
M [auth AL]Ribosom_S12_S23e4v6iAL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
N [auth AM]Ribosomal_S13e4v6iAM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
O [auth AN]Ribosomal_S14_2e4v6iAN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
P [auth AO]Ribosomal_S13_Ne4v6iAO2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
P [auth AO]Ribosomal_S15_2e4v6iAO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
Q [auth AQ]Ribosomal_S17ee4v6iAQ1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
R [auth AP]Ribosomal_S17_1e4v6iAP1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
S [auth AR]Ribosomal_S19e4v6iAR1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
B [auth AA]Ribosomal_S2_2e4v6iAA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
T [auth AS]Ribosomal_S19ee4v6iAS1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
U [auth AT]Ribosomal_S21ee4v6iAT1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
V [auth AV]Ribosomal_S25e4v6iAV1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
X [auth AX]Ribosomal_S27ee4v6iAX1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
Y [auth AY]Ribosomal_S28ee4v6iAY1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
Z [auth AZ]Ribosomal_S30e4v6iAZ1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
CA [auth AU]Ribosomal_S24ee4v6iAU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
C [auth AB]Ribosomal_S3_Ce4v6iAB2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
C [auth AB]KH_2_3e4v6iAB1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
DA [auth BA]Ribosomal_L1_2nd_1e4v6iBA2 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
DA [auth BA]Ribosomal_L1_1st_1e4v6iBA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1st_1ECOD (1.6)
EA [auth BB]Ribosomal_L2_1e4v6iBB1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
EA [auth BB]Ribosomal_L2_C_2e4v6iBB2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
FA [auth BC]Ribosomal_L3e4v6iBC1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
GA [auth BD]Ribosomal_L4e4v6iBD2 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
GA [auth BD]Ribos_L4_asso_Ce4v6iBD3 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
HA [auth BE]Ribosomal_L5_Ce4v6iBE1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
IA [auth BG]Ribosomal_L6ee4v6iBG1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
JA [auth BF]Ribosomal_L6_2e4v6iBF2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
JA [auth BF]Ribosomal_L6e4v6iBF1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
KA [auth BH]Ribosomal_L7Ae_1e4v6iBH1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
LA [auth Bs]Ribosomal_L10e4v6iBs1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
LA [auth Bs]Ribosomal_P0_L10ee4v6iBs2 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: Ribosomal_P0_L10eECOD (1.6)
MA [auth BJ]Ribosomal_L11e4v6iBJ1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
MA [auth BJ]Ribosomal_L11_Ne4v6iBJ2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
D [auth AD]Ribosomal_S4ee4v6iAD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
D [auth AD]40S_S4_Ce4v6iAD1 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
D [auth AD]RS4NTe4v6iAD3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
NA [auth BK]Ribosomal_L13e4v6iBK1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
OA [auth BN]Ribosomal_L14ee4v6iBN1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
PA [auth BM]Ribosomal_L14e4v6iBM1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
QA [auth BP]Ribosomal_L15ee4v6iBP1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
RA [auth BO]Ribosomal_L18e4v6iBO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
SA [auth BR]Ribosomal_L18e4v6iBR1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
TA [auth BT]Ribosomal_L19e_Ne4v6iBT2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
TA [auth BT]Ribosomal_L19e_Ce4v6iBT1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
UA [auth BU]Ribosomal_L21ee4v6iBU1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
VA [auth BW]Ribosomal_L22ee4v6iBW1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
WA [auth BV]Ribosomal_L22e4v6iBV1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
E [auth AC]S4e4v6iAC1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
XA [auth BX]Ribosomal_L23_3e4v6iBX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
YA [auth BZ]Ribosomal_L24ee4v6iBZ1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
ZA [auth BY]Ribosomal_L26e4v6iBY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
AB [auth Ba]Ribosomal_L27ee4v6iBa1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
CB [auth Bc]Ribosomal_L29_2e4v6iBc1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
DB [auth Bf]Ribosomal_L7Aee4v6iBf1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
EB [auth Be]Ribosomal_L30_1e4v6iBe1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
FB [auth Bg]Ribosomal_L31ee4v6iBg1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
GB [auth Bh]Ribosomal_L32ee4v6iBh1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
F [auth AE]Ribosomal_S5_C_1e4v6iAE3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
F [auth AE]Ribosomal_S5_3e4v6iAE2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
F [auth AE]Ribosomal_S5_2e4v6iAE1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
HB [auth Bi]Ribosomal_L34ee4v6iBi1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
IB [auth Bj]Ribosomal_L35Aee4v6iBj1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
JB [auth Bk]Ribosomal_L36ee4v6iBk1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
KB [auth Bm]Ribosomal_L37aee4v6iBm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
LB [auth Bl]Ribosomal_L37ee4v6iBl1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
MB [auth Bn]Ribosomal_L38ee4v6iBn1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
NB [auth Bo]Ribosomal_L39e4v6iBo1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
OB [auth Bp]Ribosomal_L40ee4v6iBp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
PB [auth Bq]Ribosomal_L41e4v6iBq1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
QB [auth Br]Ribosomal_L44e4v6iBr1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
UB [auth Bt]UNK_F_TYPEe4v6iBt1 A: alpha arraysX: 60S acidic ribosomal protein P1/P2 (From Topology)H: 60S acidic ribosomal protein P1/P2 (From Topology)T: 60S acidic ribosomal protein P1/P2F: UNK_F_TYPEECOD (1.6)
VB [auth Bu]UNK_F_TYPEe4v6iBu1 A: alpha arraysX: 60S acidic ribosomal protein P1/P2 (From Topology)H: 60S acidic ribosomal protein P1/P2 (From Topology)T: 60S acidic ribosomal protein P1/P2F: UNK_F_TYPEECOD (1.6)
WB [auth Bv]Ribosomal_60se4v6iBv1 A: alpha arraysX: 60S acidic ribosomal protein P1/P2 (From Topology)H: 60S acidic ribosomal protein P1/P2 (From Topology)T: 60S acidic ribosomal protein P1/P2F: Ribosomal_60sECOD (1.6)
XB [auth Bw]Ribosomal_60se4v6iBw1 A: alpha arraysX: 60S acidic ribosomal protein P1/P2 (From Topology)H: 60S acidic ribosomal protein P1/P2 (From Topology)T: 60S acidic ribosomal protein P1/P2F: Ribosomal_60sECOD (1.6)
YB [auth BQ]Ribosomal_L5ee4v6iBQ1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
AC [auth BS]Ribosomal_L18Ae4v6iBS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
BC [auth BI]Ribosomal_L16e4v6iBI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
H [auth AF]Ribosomal_S7_1e4v6iAF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
I [auth AH]Ribosomal_S8_N_1e4v6iAH2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
I [auth AH]Ribosomal_S8_C_1e4v6iAH1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth Aa]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
K [auth AJ]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
L [auth AK]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
O [auth AN]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
P [auth AO]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
P [auth AO]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
Q [auth AQ]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
S [auth AR]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
B [auth AA]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
T [auth AS]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
U [auth AT]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
V [auth AV]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
X [auth AX]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
Y [auth AY]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
C [auth AB]PF07650KH domain (KH_2)KH domain- Domain
C [auth AB]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
FA [auth BC]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
GA [auth BD]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
HA [auth BE]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
HA [auth BE]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
IA [auth BG]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
JA [auth BF]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
KA [auth BH]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
LA [auth Bs]PF0042860s Acidic ribosomal protein (Ribosomal_60s)60s Acidic ribosomal protein- Family
LA [auth Bs]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1].Domain
LA [auth Bs]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
NA [auth BK]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
OA [auth BN]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
OA [auth BN]PF00467KOW motif (KOW)KOW motif- Family
QA [auth BP]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
RA [auth BO]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
UA [auth BU]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
VA [auth BW]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
WA [auth BV]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
E [auth AC]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
E [auth AC]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
XA [auth BX]PF03939Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN)Ribosomal protein L23, N-terminal domain- Family
XA [auth BX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
YA [auth BZ]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
ZA [auth BY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
ZA [auth BY]PF00467KOW motif (KOW)KOW motif- Family
AB [auth Ba]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
BB [auth Bd]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
DB [auth Bf]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
EB [auth Be]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
EB [auth Be]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
FB [auth Bg]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
GB [auth Bh]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
F [auth AE]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
F [auth AE]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
HB [auth Bi]PF01199Ribosomal protein L34e (Ribosomal_L34e)Ribosomal protein L34e- Family
IB [auth Bj]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
JB [auth Bk]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
LB [auth Bl]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
MB [auth Bn]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
NB [auth Bo]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
OB [auth Bp]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
UB [auth Bt],
VB [auth Bu]
PF0042860s Acidic ribosomal protein (Ribosomal_60s)60s Acidic ribosomal protein- Family
WB [auth Bv],
XB [auth Bw]
PF0042860s Acidic ribosomal protein (Ribosomal_60s)60s Acidic ribosomal protein- Family
YB [auth BQ]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
YB [auth BQ]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
AC [auth BS]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
BC [auth BI]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
H [auth AF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
I [auth AH]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth Aa]40S ribosomal protein RACK1 (RACK1)
J [auth AI]40S ribosomal protein rpS16 (S9p)---
K [auth AJ]40S ribosomal protein rpS20 (S10p)
L [auth AK]40S ribosomal protein rpS14 (S11p)
M [auth AL]40S ribosomal protein rpS23 (S12p)---
N [auth AM]40S ribosomal protein rpS18 (S13p)---
O [auth AN]40S ribosomal protein rpS29 (S14p)
P [auth AO]40S ribosomal protein rpS13 (S15p)
Q [auth AQ]40S ribosomal protein rpS17 (S17e)
R [auth AP]40S ribosomal protein rpS11 (S17p)---
S [auth AR]40S ribosomal protein rpS15 (S19p)
B [auth AA]40S ribosomal protein rpS0 (S2p)
T [auth AS]40S ribosomal protein rpS19 (S19e)
U [auth AT]40S ribosomal protein rpS21 (S21e)
V [auth AV]40S ribosomal protein rpS25 (S25e)
W [auth AW]40S ribosomal protein rpS26 (S26e)---
X [auth AX]40S ribosomal protein rpS27 (S27e)
Y [auth AY]40S ribosomal protein rpS28 (S28e)
Z [auth AZ]40S ribosomal protein rpS30 (S30e)---
AA [auth Ab]Unknown 40S ribosomal protein XS1---
BA [auth Ac]Unknown 40S ribosomal protein XS2---
CA [auth AU]40S ribosomal protein S24---
C [auth AB]40S ribosomal protein rpS3 (S3p)
DA [auth BA]60S ribosomal protein rpL1 (L1p)---
EA [auth BB]60S ribosomal protein rpL2 (L2p)---
FA [auth BC]60S ribosomal protein rpL3 (L3p)
GA [auth BD]60S ribosomal protein rpL4 (L4p)
HA [auth BE]60S ribosomal protein rpL11 (L5p)
IA [auth BG]60S ribosomal protein rpL6 (L6e)
JA [auth BF]60S ribosomal protein rpL9 (L6p)
KA [auth BH]60S ribosomal protein rpL8 (L7ae)
LA [auth Bs]60S acidic ribosomal protein rpP0 (L10P)
MA [auth BJ]60S ribosomal protein rpL12 (L11p)---
D [auth AD]40S ribosomal protein rpS4 (S4e)---
NA [auth BK]60S ribosomal protein rpL16 (L13p)
OA [auth BN]60S ribosomal protein rpL14 (L14e)
PA [auth BM]60S ribosomal protein rpL23 (L14p)---
QA [auth BP]60S ribosomal protein rpL15 (L15e)
RA [auth BO]60S ribosomal protein rpL28 (L15p)
SA [auth BR]60S ribosomal protein rpL18 (L18e)---
TA [auth BT]60S ribosomal protein rpL19 (L19e)---
UA [auth BU]60S ribosomal protein rpL21 (L21e)
VA [auth BW]60S ribosomal protein rpL22 (L22e)
WA [auth BV]60S ribosomal protein rpL17 (L22p)
E [auth AC]40S ribosomal protein rpS9 (S4p)
XA [auth BX]60S ribosomal protein rpL25 (L23p)
YA [auth BZ]60S ribosomal protein rpL24 (L24e)
ZA [auth BY]60S ribosomal protein rpL26 (L24p)
AB [auth Ba]60S ribosomal protein rpL27 (L27e)
BB [auth Bd]60S ribosomal protein rpL29 (L29e)
CB [auth Bc]60S ribosomal protein rpL35 (L29p)---
DB [auth Bf]60S ribosomal protein rpL30 (L30e)
EB [auth Be]60S ribosomal protein rpL7 (L30p)
FB [auth Bg]60S ribosomal protein rpL31 (L31e)
GB [auth Bh]60S ribosomal protein pL32 (L32e)
F [auth AE]40S ribosomal protein rpS2 (S5p)
HB [auth Bi]60S ribosomal protein rpL34 (L34e)
IB [auth Bj]60S ribosomal protein rpL33 (L35ae)
JB [auth Bk]60S ribosomal protein rpL36 (L36e)
KB [auth Bm]60S ribosomal protein rpL43 (L37ae)---
LB [auth Bl]60S ribosomal protein rpL37 (L37e)
MB [auth Bn]60S ribosomal protein rpL38 (L38e)
NB [auth Bo]60S ribosomal protein rpL39 (L39e)
OB [auth Bp]60S ribosomal protein rpL40 (L40e)
PB [auth Bq]60S ribosomal protein rpL41 (L41e)---
QB [auth Br]60S ribosomal protein rpL42 (L44e)---
G [auth AG]40S ribosomal protein rpS7 (S7e)---
RB [auth Bx],
SB [auth By]
Unknown protein---
TB [auth Bz]Unknown protein---
UB [auth Bt],
VB [auth Bu]
60S acidic ribosomal protein rpP11 (P1)
WB [auth Bv],
XB [auth Bw]
60S acidic ribosomal protein (P2)
YB [auth BQ]60S ribosomal protein rpL5 (L18p)
ZB [auth BL]60S ribosomal protein rpL13 (L13e)---
AC [auth BS]60S ribosomal protein rpL20 (L18ae)
BC [auth BI]60S ribosomal protein rpL10 (L10e)
CC [auth CA]18S rRNA---
DC [auth CB]P-SITE TRNA ASP---
H [auth AF]40S ribosomal protein rpS5 (S7p)
EC [auth CC]MRNA, RNA (5'-R(P*AP*AP*AP*AP*GP*AP*CP*UP*UP*CP*A)-3')---
FC [auth DA]25S rRNA---
GC [auth DB]5.8S rRNA---
HC [auth DC]5S rRNA---
I [auth AH]40S ribosomal protein rpS22 (S8p)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth Aa]IPR019775WD40 repeat, conserved siteConserved Site
A [auth Aa]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
A [auth Aa]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
A [auth Aa]IPR045223Small ribosomal subunit protein RACK1-likeFamily
A [auth Aa]IPR001680WD40 repeatRepeat
A [auth Aa]IPR020472G-protein beta WD-40 repeatRepeat
K [auth AJ]IPR001848Small ribosomal subunit protein uS10Family
K [auth AJ]IPR027486Small ribosomal subunit protein uS10 domainDomain
K [auth AJ]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
K [auth AJ]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
K [auth AJ]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
L [auth AK]IPR001971Small ribosomal subunit protein uS11Family
L [auth AK]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
L [auth AK]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
O [auth AN]IPR001209Small ribosomal subunit protein uS14Family
O [auth AN]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
O [auth AN]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
O [auth AN]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
P [auth AO]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
P [auth AO]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
P [auth AO]IPR000589Small ribosomal subunit protein uS15Family
P [auth AO]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
Q [auth AQ]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
Q [auth AQ]IPR001210Small ribosomal subunit protein eS17Family
Q [auth AQ]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
S [auth AR]IPR002222Small ribosomal subunit protein uS19Family
S [auth AR]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
S [auth AR]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
S [auth AR]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
B [auth AA]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
B [auth AA]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth AA]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth AA]IPR001865Small ribosomal subunit protein uS2Family
B [auth AA]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
T [auth AS]IPR001266Small ribosomal subunit protein eS19Family
T [auth AS]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
T [auth AS]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
T [auth AS]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
U [auth AT]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
U [auth AT]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
U [auth AT]IPR001931Small ribosomal subunit protein eS21Family
V [auth AV]IPR004977Small ribosomal subunit protein eS25Family
V [auth AV]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
X [auth AX]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
X [auth AX]IPR000592Small ribosomal subunit protein eS27Family
X [auth AX]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Y [auth AY]IPR028626Ribosomal protein eS28 conserved siteConserved Site
Y [auth AY]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Y [auth AY]IPR000289Small ribosomal subunit protein eS28Family
C [auth AB]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth AB]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
C [auth AB]IPR004044K Homology domain, type 2Domain
C [auth AB]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth AB]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
C [auth AB]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
C [auth AB]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
FA [auth BC]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
FA [auth BC]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
FA [auth BC]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
FA [auth BC]IPR000597Large ribosomal subunit protein uL3Family
FA [auth BC]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
GA [auth BD]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
GA [auth BD]IPR002136Large ribosomal subunit protein uL4Family
GA [auth BD]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
GA [auth BD]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
GA [auth BD]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
HA [auth BE]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
HA [auth BE]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
HA [auth BE]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
HA [auth BE]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
HA [auth BE]IPR002132Large ribosomal subunit protein uL5Family
IA [auth BG]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
IA [auth BG]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IA [auth BG]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
IA [auth BG]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IA [auth BG]IPR000915Large ribosomal subunit protein eL6Family
JA [auth BF]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
JA [auth BF]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
JA [auth BF]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
JA [auth BF]IPR000702Large ribosomal subunit protein uL6-likeFamily
KA [auth BH]IPR001921Large ribosomal subunit protein eL8Family
KA [auth BH]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
KA [auth BH]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
KA [auth BH]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
KA [auth BH]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
LA [auth Bs]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
LA [auth Bs]IPR001790Large ribosomal subunit protein uL10Family
LA [auth Bs]IPR030670Large ribosomal subunit protein uL10, eukaryotesFamily
LA [auth Bs]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
LA [auth Bs]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
NA [auth BK]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
NA [auth BK]IPR005822Large ribosomal subunit protein uL13Family
NA [auth BK]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
NA [auth BK]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
OA [auth BN]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
OA [auth BN]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
OA [auth BN]IPR039660Large ribosomal subunit protein eL14Family
OA [auth BN]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
OA [auth BN]IPR002784Large ribosomal subunit protein eL14 domainDomain
OA [auth BN]IPR005824KOWDomain
QA [auth BP]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
QA [auth BP]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
QA [auth BP]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
QA [auth BP]IPR000439Large ribosomal subunit protein eL15Family
RA [auth BO]IPR021131Large ribosomal subunit protein uL15/eL18Domain
RA [auth BO]IPR030878Large ribosomal subunit protein uL15Family
RA [auth BO]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
RA [auth BO]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
UA [auth BU]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
UA [auth BU]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
UA [auth BU]IPR001147Large ribosomal subunit protein eL21Family
UA [auth BU]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
VA [auth BW]IPR002671Large ribosomal subunit protein eL22Family
VA [auth BW]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
WA [auth BV]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
WA [auth BV]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
WA [auth BV]IPR001063Large ribosomal subunit protein uL22Family
WA [auth BV]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
E [auth AC]IPR002942RNA-binding S4 domainDomain
E [auth AC]IPR022801Small ribosomal subunit protein uS4Family
E [auth AC]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
E [auth AC]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
E [auth AC]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
E [auth AC]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
XA [auth BX]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
XA [auth BX]IPR013025Large ribosomal subunit protein uL23-likeFamily
XA [auth BX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
XA [auth BX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
XA [auth BX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
YA [auth BZ]IPR000988Large ribosomal subunit protein eL24-relatedFamily
YA [auth BZ]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
YA [auth BZ]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
ZA [auth BY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
ZA [auth BY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
ZA [auth BY]IPR005824KOWDomain
ZA [auth BY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
ZA [auth BY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
ZA [auth BY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
AB [auth Ba]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
AB [auth Ba]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
AB [auth Ba]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AB [auth Ba]IPR001141Large ribosomal subunit protein eL27Family
AB [auth Ba]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
BB [auth Bd]IPR002673Large ribosomal subunit protein eL29Family
DB [auth Bf]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
DB [auth Bf]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
DB [auth Bf]IPR039109Large ribosomal subunit protein eL30-likeFamily
DB [auth Bf]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
EB [auth Be]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
EB [auth Be]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
EB [auth Be]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
EB [auth Be]IPR039699Large ribosomal subunit protein uL30Family
EB [auth Be]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
EB [auth Be]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
EB [auth Be]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
FB [auth Bg]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
FB [auth Bg]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
FB [auth Bg]IPR000054Large ribosomal subunit protein eL31Family
GB [auth Bh]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
GB [auth Bh]IPR001515Large ribosomal subunit protein eL32Family
GB [auth Bh]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
F [auth AE]IPR000851Small ribosomal subunit protein uS5Family
F [auth AE]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
F [auth AE]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
F [auth AE]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
F [auth AE]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
F [auth AE]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
F [auth AE]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
HB [auth Bi]IPR008195Large ribosomal subunit protein eL34Family
HB [auth Bi]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
IB [auth Bj]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
IB [auth Bj]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IB [auth Bj]IPR001780Large ribosomal subunit protein eL33Family
IB [auth Bj]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
JB [auth Bk]IPR000509Large ribosomal subunit protein eL36Family
JB [auth Bk]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
LB [auth Bl]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
LB [auth Bl]IPR001569Large ribosomal subunit protein eL37Family
LB [auth Bl]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
LB [auth Bl]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MB [auth Bn]IPR002675Large ribosomal subunit protein eL38Family
MB [auth Bn]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
NB [auth Bo]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
NB [auth Bo]IPR000077Large ribosomal subunit protein eL39Family
NB [auth Bo]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
OB [auth Bp]IPR019954Ubiquitin conserved siteConserved Site
OB [auth Bp]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
OB [auth Bp]IPR000626Ubiquitin-like domainDomain
OB [auth Bp]IPR019956Ubiquitin domainDomain
OB [auth Bp]IPR001975Large ribosomal subunit protein eL40 domainDomain
OB [auth Bp]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
UB [auth Bt],
VB [auth Bu]
IPR027534Large ribosomal subunit protein P1/P2Family
UB [auth Bt],
VB [auth Bu]
IPR038716Large ribosomal subunit protein P1/P2, N-terminal domainHomologous Superfamily
WB [auth Bv],
XB [auth Bw]
IPR027534Large ribosomal subunit protein P1/P2Family
WB [auth Bv],
XB [auth Bw]
IPR038716Large ribosomal subunit protein P1/P2, N-terminal domainHomologous Superfamily
WB [auth Bv],
XB [auth Bw]
IPR044076Large ribosomal subunit protein P2, eukaryotesFamily
YB [auth BQ]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
YB [auth BQ]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
AC [auth BS]IPR028877Large ribosomal subunit protein eL20Family
AC [auth BS]IPR023573Large ribosomal subunit protein eL20 domainDomain
AC [auth BS]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
BC [auth BI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
BC [auth BI]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
BC [auth BI]IPR016180Large ribosomal subunit protein uL16 domainDomain
BC [auth BI]IPR047873Large ribosomal subunit protein uL16Family
BC [auth BI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
H [auth AF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
H [auth AF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
H [auth AF]IPR000235Small ribosomal subunit protein uS7Family
H [auth AF]IPR023798Small ribosomal subunit protein uS7 domainDomain
H [auth AF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
I [auth AH]IPR000630Small ribosomal subunit protein uS8Family
I [auth AH]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
I [auth AH]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily