Crystal structure of pneumolysin from Streptococcus pneumoniae
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d4qqaa4 | All beta proteins | Perfringolysin C-terminal-like | Perfringolysin C-terminal-like | Perfringolysin C-terminal-like | Pneumolysin C-terminal domain | (Streptococcus pneumoniae ) [TaxId: 1313 ], | SCOPe (2.08) |
| A | d4qqaa3 | Membrane and cell surface proteins and peptides | Perfringolysin N-terminal-like | Perfringolysin N-terminal-like | Perfringolysin N-terminal-like | Pneumolysin N-terminal domain | (Streptococcus pneumoniae ) [TaxId: 1313 ], | SCOPe (2.08) |
| A | d4qqaa2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Streptococcus pneumoniae ) [TaxId: 1313 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Peptidase_M24 | e4qqaA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: 26S proteasome subunit Rpn2 C-terminal domain | T: 26S proteasome subunit Rpn2 C-terminal domain | F: Peptidase_M24 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.40.1430 | Mainly Beta | Sandwich | Immunoglobulin-like | Perfringolysin, domain 4 | CATH (utative) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Pneumolysin |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR038700 | Thiol-activated cytolysin, C-terminal domain superfamily | Homologous Superfamily | |
| IPR036359 | Thiol-activated cytolysin superfamily | Homologous Superfamily | |
| IPR035390 | Thiol-activated cytolysin C-terminal | Domain | |
| IPR001869 | Thiol-activated cytolysin | Family | |
| IPR036363 | Thiol-activated cytolysin, alpha-beta domain superfamily | Homologous Superfamily |














