Crystal structure of human CAPERalpha UHM bound to SF3b155 ULM5
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | RRM_1_9 | e4oz1A1 | A: a+b two layers | X: Alpha-beta plaits | H: RNA-binding domain, RBD (From Topology) | T: RNA-binding domain, RBD | F: RRM_1_9 | ECOD (1.6) |
| B | RRM_1_9 | e4oz1B1 | A: a+b two layers | X: Alpha-beta plaits | H: RNA-binding domain, RBD (From Topology) | T: RNA-binding domain, RBD | F: RRM_1_9 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.30.70.330 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | RRM (RNA recognition motif) domain | CATH (4.3.0) |
| B | 3.30.70.330 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | RRM (RNA recognition motif) domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR054573 | Phosphatase PP2A regulatory subunit A/Splicing factor 3B subunit 1-like, HEAT repeat | Domain | |
| IPR016024 | Armadillo-type fold | Homologous Superfamily | |
| IPR011989 | Armadillo-like helical | Homologous Superfamily | |
| IPR015016 | Splicing factor 3B subunit 1 | Domain | |
| IPR038737 | Splicing factor 3B subunit 1-like | Family | |
| IPR000504 | RNA recognition motif domain | Domain | |
| IPR006509 | Splicing factor, RBM39-like | Family | |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily | |
| IPR003954 | RNA recognition motif domain, eukaryotic-type | Domain | |
| IPR035979 | RNA-binding domain superfamily | Homologous Superfamily | |
| IPR029123 | Splicing factor RBM39, linker | Domain |














