Annotations: 4OYD

Crystal structure of a computationally designed inhibitor of an Epstein-Barr viral Bcl-2 protein

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Serpin	e4oydB01	A: a/b three-layered sandwiches	X: Rossmann-like	H: P-loop domains-related	T: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	F: Serpin	ECOD (v294.1)
C	Kinesin,Microtub_bd	e4oydC1	A: a/b three-layered sandwiches	X: YrdC/RibB	H: YrdC/RibB	T: YrdC/RibB	F: Kinesin,Microtub_bd	ECOD (v294.1)
A	Kinesin,Microtub_bd	e4oydA1	A: a/b three-layered sandwiches	X: YrdC/RibB	H: YrdC/RibB	T: YrdC/RibB	F: Kinesin,Microtub_bd	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	1.10.132.20	Mainly Alpha	Orthogonal Bundle	Topoisomerase I	Chain A, domain 4	CATH (4.3.0)
B	1.10.132.20	Mainly Alpha	Orthogonal Bundle	Topoisomerase I	Chain A, domain 4	CATH (4.3.0)
C	1.10.437.10	Mainly Alpha	Orthogonal Bundle	Apoptosis Regulator Bcl-x	Blc2-like	CATH (4.3.0)
A	1.10.437.10	Mainly Alpha	Orthogonal Bundle	Apoptosis Regulator Bcl-x	Blc2-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C	PF00452	Apoptosis regulator proteins, Bcl-2 family (Bcl-2)	Apoptosis regulator proteins, Bcl-2 family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, D	Computationally designed Inhibitor	-	-	-
A, C	Apoptosis regulator BHRF1	-	symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host apoptosis biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host programmed cell death symbiont-mediated perturbation of host process symbiont-mediated suppression of host programmed cell death symbiont-mediated perturbation of host apoptosis modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host autophagy symbiont-mediated perturbation of host autophagy	host cellular component cellular anatomical structure host cell part host cell membrane other organism part host intracellular membrane-bounded organelle host intracellular part host cell mitochondrion host cell cytoplasm part host intracellular organelle host cell cytoplasm host intracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C	IPR020726	Apoptosis regulator, Bcl-2, BH2 motif, conserved site	Conserved Site
A, C	IPR036834	Bcl-2-like superfamily	Homologous Superfamily
A, C	IPR002475	Bcl2-like	Family
A, C	IPR046371	Bcl-2, Bcl-2 homology region 1-3	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.