4OVN | pdb_00004ovn

Voltage-gated Sodium Channel 1.5 (Nav1.5) C-terminal domain in complex with Calmodulin poised for activation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyEF-hand 8033438 3001983 SCOP2B (2022-06-29)
I [auth E]SCOP2B SuperfamilyEF-hand 8033438 3001983 SCOP2B (2022-06-29)
G [auth D]SCOP2B SuperfamilyEF-hand 8033438 3001983 SCOP2B (2022-06-29)
E [auth C]SCOP2B SuperfamilyEF-hand 8033438 3001983 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyEF-hand 8033438 3001983 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth G]EF-hand_7_6e4ovnG1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_6ECOD (1.6)
D [auth G]IQ_likee4ovnG2 A: extended segmentsX: Voltage gated calcium channel IQ domain (From Topology)H: Voltage gated calcium channel IQ domain (From Topology)T: Voltage gated calcium channel IQ domainF: IQ_likeECOD (1.6)
F [auth H]EF-hand_7_6e4ovnH1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_6ECOD (1.6)
F [auth H]IQ_likee4ovnH2 A: extended segmentsX: Voltage gated calcium channel IQ domain (From Topology)H: Voltage gated calcium channel IQ domain (From Topology)T: Voltage gated calcium channel IQ domainF: IQ_likeECOD (1.6)
H [auth I]EF-hand_7_6e4ovnI1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_6ECOD (1.6)
H [auth I]IQ_likee4ovnI2 A: extended segmentsX: Voltage gated calcium channel IQ domain (From Topology)H: Voltage gated calcium channel IQ domain (From Topology)T: Voltage gated calcium channel IQ domainF: IQ_likeECOD (1.6)
JEF-hand_7_6e4ovnJ1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_6ECOD (1.6)
JIQ_likee4ovnJ2 A: extended segmentsX: Voltage gated calcium channel IQ domain (From Topology)H: Voltage gated calcium channel IQ domain (From Topology)T: Voltage gated calcium channel IQ domainF: IQ_likeECOD (1.6)
B [auth F]EF-hand_7_6e4ovnF1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_6ECOD (1.6)
B [auth F]IQ_likee4ovnF2 A: extended segmentsX: Voltage gated calcium channel IQ domain (From Topology)H: Voltage gated calcium channel IQ domain (From Topology)T: Voltage gated calcium channel IQ domainF: IQ_likeECOD (1.6)
AEF-hand_7_8e4ovnA1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
AEF-hand_7_5e4ovnA2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)
I [auth E]EF-hand_7_8e4ovnE1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
I [auth E]EF-hand_7_5e4ovnE2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)
G [auth D]EF-hand_7_8e4ovnD1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
G [auth D]EF-hand_7_5e4ovnD2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)
E [auth C]EF-hand_7_8e4ovnC1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
E [auth C]EF-hand_7_5e4ovnC2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)
C [auth B]EF-hand_7_8e4ovnB1 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_8ECOD (1.6)
C [auth B]EF-hand_7_5e4ovnB2 A: alpha arraysX: EF-handH: EF-hand-relatedT: EF-handF: EF-hand_7_5ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
C [auth B],
E [auth C],
G [auth D],
I [auth E]
PF13499EF-hand domain pair (EF-hand_7)EF-hand domain pairDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth F],
D [auth G],
F [auth H],
H [auth I],
J
Sodium channel protein type 5 subunit alpha
A,
C [auth B],
E [auth C],
G [auth D],
I [auth E]
Calmodulin

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth F],
D [auth G],
F [auth H],
H [auth I],
J
PharosQ14524
A,
C [auth B],
E [auth C],
G [auth D],
I [auth E]
PharosP0DP23