Crystal structure of a putative lipoprotein (RUMGNA_00858) from Ruminococcus gnavus ATCC 29149 at 1.76 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d4ib2b_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Mediterraneibacter gnavus ATCC 29149 ) [TaxId: 411470 ], | SCOPe (2.08) |
| A | d4ib2a_ | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Mediterraneibacter gnavus ATCC 29149 ) [TaxId: 411470 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Type 2 solute binding protein-like | 8061839 | 3000083 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | Phosphate binding protein-like | 8061838 | 4000229 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Type 2 solute binding protein-like | 8061839 | 3000083 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | LysR_substrate | e4ib2B1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: LysR_substrate | ECOD (v294.1) |
| A | LysR_substrate | e4ib2A1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: LysR_substrate | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| A | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Putative Lipoprotein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR004872 | Lipoprotein NlpA family | Family |
