TCR interaction with peptide mimics of nickel offers structural insights in nickel contact allergy
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054671 | 3000071 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | MHC antigen-recognition domain | 8040455 | 3000521 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | MHC antigen-recognition domain | 8040455 | 3000521 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054671 | 3000071 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| J | Cathelicidins | e4h1lJ1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Cathelicidins | ECOD (v294.1) |
| H | PK_Tyr_Ser-Thr | e4h1lH1 | A: a/b three-layered sandwiches | X: Globin-like | H: Flavoproteins/Phosphotyrosine protein phosphatases-like | T: (Phosphotyrosine protein) phosphatases II | F: PK_Tyr_Ser-Thr | ECOD (v294.1) |
| I | Cathelicidins | e4h1lI1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Cathelicidins | ECOD (v294.1) |
| G | PK_Tyr_Ser-Thr | e4h1lG1 | A: a/b three-layered sandwiches | X: Globin-like | H: Flavoproteins/Phosphotyrosine protein phosphatases-like | T: (Phosphotyrosine protein) phosphatases II | F: PK_Tyr_Ser-Thr | ECOD (v294.1) |
| E | Alpha-amylase | e4h1lE2 | A: a/b three-layered sandwiches | X: Fusion glycoprotein F2 | H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | F: Alpha-amylase | ECOD (v294.1) |
| E | DNA_pol_B_exo1 | e4h1lE3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Hemagglutinin HA2 chain | T: Hemagglutinin HA2 chain | F: DNA_pol_B_exo1 | ECOD (v294.1) |
| B | PK_Tyr_Ser-Thr | e4h1lB1 | A: a/b three-layered sandwiches | X: Globin-like | H: Flavoproteins/Phosphotyrosine protein phosphatases-like | T: (Phosphotyrosine protein) phosphatases II | F: PK_Tyr_Ser-Thr | ECOD (v294.1) |
| B | DNA_pol_B_exo1 | e4h1lB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Hemagglutinin HA2 chain | T: Hemagglutinin HA2 chain | F: DNA_pol_B_exo1 | ECOD (v294.1) |
| D | V-set | e4h1lD7 | A: a/b three-layered sandwiches | X: Subtilisin-like | H: Subtilisin-like | T: Subtilisin-like | F: V-set | ECOD (v294.1) |
| A | PK_Tyr_Ser-Thr | e4h1lA1 | A: a/b three-layered sandwiches | X: Globin-like | H: Flavoproteins/Phosphotyrosine protein phosphatases-like | T: (Phosphotyrosine protein) phosphatases II | F: PK_Tyr_Ser-Thr | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| TR Ani2.3 | V-BETA | Homo sapiens (human) | TRBV19*01, TRBV19*03, TRBJ2-2*01 | V-DOMAIN V-BETA | TR | FV-ALPHA_BETA | IMGT (202612-0) | |
| TR Ani2.3 | V-ALPHA | Homo sapiens (human) | TRAV8-3*01, TRAJ37*01 | V-DOMAIN V-ALPHA | TR | FV-ALPHA_BETA | IMGT (202612-0) | |
| MH2 HLA-DRA*0101_HLA-DRB3*0301 | II-BETA | Homo sapiens (human) | HLA-DRB3*0301 | G-DOMAIN G-BETA, C-LIKE-DOMAIN C-LIKE | MH | MH2-ALPHA_BETA | IMGT (202612-0) | |
| MH2 HLA-DRA*0101_HLA-DRB3*0301 | II-ALPHA | Homo sapiens (human) | HLA-DRA*0101, HLA-DRA*0102 | G-DOMAIN G-ALPHA, C-LIKE-DOMAIN C-LIKE | MH | MH2-ALPHA_BETA | IMGT (202612-0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00969 | Class II histocompatibility antigen, beta domain (MHC_II_beta) | Class II histocompatibility antigen, beta domain | Domain | ||
| PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | Domain | ||
| PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | Domain | ||
| PF00993 | Class II histocompatibility antigen, alpha domain (MHC_II_alpha) | Class II histocompatibility antigen, alpha domain | Domain |














