4FTE | pdb_00004fte

Crystal structure of the D75N mutant capsid of Flock House virus


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyPositive stranded ssRNA viruses-like 8071984 3000918 SCOP2B (2022-06-29)
BSCOP2 FamilyNodaviridae-like VP 8071983 4003472 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyPositive stranded ssRNA viruses-like 8071984 3000918 SCOP2 (2022-06-29)
CSCOP2B SuperfamilyPositive stranded ssRNA viruses-like 8071984 3000918 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARNA_pol_Rpb4e4fteA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: SH3T: SH3F: RNA_pol_Rpb4ECOD (v294.1)
BFRB_dome4fteB1 A: a/b three-layered sandwichesX: Ribonuclease H-likeH: Ribonuclease H-likeT: Ribonuclease H-likeF: FRB_domECOD (v294.1)
CFRB_dome4fteC1 A: a/b three-layered sandwichesX: Ribonuclease H-likeH: Ribonuclease H-likeT: Ribonuclease H-likeF: FRB_domECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
B2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
C2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Capsid protein alpha
D [auth R]Random cellular RNAs---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR029053Viral coat protein subunitHomologous Superfamily
A, B, C
IPR000696Peptidase A6, nodavirus coat proteinFamily