4EHS
Crystal structure of Helicobacter pylori DnaG Primase C terminal domain
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | DnaG C-terminal domain-like | 8092781 | 3001990 | SCOP2B (2022-06-29) |
B | SCOP2 Family | DnaG C-terminal domain-like | 8046060 | 4002997 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | DnaG C-terminal domain-like | 8092781 | 3001990 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | DnaGprimase_HBD | e4ehsA1 | A: alpha arrays | X: DnaB helicase N-terminal domain-related (From Topology) | H: DnaB helicase N-terminal domain-related (From Topology) | T: DnaB helicase N-terminal domain-related | F: DnaGprimase_HBD | ECOD (1.6) |
B | DnaGprimase_HBD | e4ehsB2 | A: alpha arrays | X: DnaB helicase N-terminal domain-related (From Topology) | H: DnaB helicase N-terminal domain-related (From Topology) | T: DnaB helicase N-terminal domain-related | F: DnaGprimase_HBD | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.860.10 | Mainly Alpha | Orthogonal Bundle | DNAb Helicase | Chain A | CATH (4.3.0) |
B | 1.10.860.10 | Mainly Alpha | Orthogonal Bundle | DNAb Helicase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16730 | DnaG-primase C-terminal, helicase-binding domain (DnaGprimase_HBD) | DnaG-primase C-terminal, helicase-binding domain | DnaG-primase_C is the C-terminal of a set of eubacterial DnaG primases that are a single-stranded DNA (ssDNA)-dependent RNA polymerase responsible for the synthesis of oligonucleotide primers needed for the replication of DNA. It interacts with helic ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR037068 | DNA primase, catalytic core, N-terminal domain superfamily | Homologous Superfamily | |
IPR016136 | DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal | Homologous Superfamily | |
IPR034151 | Bacterial DnaG primase, TOPRIM domain | Domain | |
IPR030846 | DNA primase DnaG, bacteria | Family | |
IPR006295 | DNA primase, DnaG | Domain | |
IPR006171 | TOPRIM domain | Domain | |
IPR002694 | Zinc finger, CHC2-type | Domain | |
IPR036977 | DNA Primase, CHC2-type zinc finger | Homologous Superfamily | |
IPR013264 | DNA primase DNAG, catalytic core, N-terminal | Domain | |
IPR031988 | DNA primase DnaG, C-terminal helicase-binding domain | Domain | |
IPR050219 | DnaG Primase | Family |