4DYU
The crystal structure of DNA starvation/stationary phase protection protein Dps from Yersinia pestis KIM 10
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ferritin-like | 8075802 | 3001658 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ferritin-like | 8075802 | 3001658 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ferritin-like | 8075802 | 3001658 | SCOP2B (2022-06-29) |
D | SCOP2 Family | Ferritin | 8075801 | 4000839 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | Ferritin-like | 8075802 | 3001658 | SCOP2 (2022-06-29) |
E | SCOP2B Superfamily | Ferritin-like | 8075802 | 3001658 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Ferritin-like | 8075802 | 3001658 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Ferritin-like | 8075802 | 3001658 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Ferritin-like | 8075802 | 3001658 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Ferritin-like | 8075802 | 3001658 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | Ferritin-like | 8075802 | 3001658 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Ferritin-like | 8075802 | 3001658 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Ferritin-like | 8075802 | 3001658 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ferritin_1 | e4dyuA2 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: Ferritin_1 | ECOD (1.6) |
B | Ferritin_1 | e4dyuB2 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: Ferritin_1 | ECOD (1.6) |
C | Ferritin_1 | e4dyuC2 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: Ferritin_1 | ECOD (1.6) |
D | Ferritin_1 | e4dyuD2 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: Ferritin_1 | ECOD (1.6) |
E | Ferritin_1 | e4dyuE2 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: Ferritin_1 | ECOD (1.6) |
F | Ferritin_1 | e4dyuF2 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: Ferritin_1 | ECOD (1.6) |
G | Ferritin_1 | e4dyuG2 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: Ferritin_1 | ECOD (1.6) |
H | Ferritin_1 | e4dyuH2 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: Ferritin_1 | ECOD (1.6) |
I | Ferritin_1 | e4dyuI2 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: Ferritin_1 | ECOD (1.6) |
J | Ferritin_1 | e4dyuJ2 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: Ferritin_1 | ECOD (1.6) |
K | Ferritin_1 | e4dyuK2 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: Ferritin_1 | ECOD (1.6) |
L | Ferritin_1 | e4dyuL2 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: Ferritin_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012347 | Ferritin-like | Homologous Superfamily | |
IPR009078 | Ferritin-like superfamily | Homologous Superfamily | |
IPR023067 | DNA protection during starvation protein, gammaproteobacteria | Family | |
IPR002177 | DNA-binding protein Dps | Family | |
IPR023188 | DNA-binding protein Dps, conserved site | Conserved Site | |
IPR008331 | Ferritin/DPS protein domain | Domain |