Co-crystal structure of the PPIase domain of FKBP51, Rapamycin and the FRB fragment of mTOR at low pH
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | 8036936 | 3001600 | SCOP2B (2022-06-29) |
| D [auth E] | SCOP2B Superfamily | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | 8036936 | 3001600 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Rotamase-like | 8042824 | 3000622 | SCOP2B (2022-06-29) |
| C [auth D] | SCOP2B Superfamily | Rotamase-like | 8042824 | 3000622 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | ABC_tran | e4drhB1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: ABC_tran | ECOD (v294.1) |
| D [auth E] | PHP | e4drhE1 | A: a/b three-layered sandwiches | X: Ribonuclease H-like | H: Ribonuclease H-like | T: Ribonuclease H-like | F: PHP | ECOD (v294.1) |
| A | PHP | e4drhA1 | A: a/b three-layered sandwiches | X: Ribonuclease H-like | H: Ribonuclease H-like | T: Ribonuclease H-like | F: PHP | ECOD (v294.1) |
| C [auth D] | Vinculin | e4drhD2 | A: a/b three-layered sandwiches | X: DEATH domain | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: Vinculin | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 1.20.120.150 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | FKBP12-rapamycin binding domain | CATH (4.3.0) |
| D [auth E] | 1.20.120.150 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | FKBP12-rapamycin binding domain | CATH (4.3.0) |
| A | 3.10.50.40 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
| C [auth D] | 3.10.50.40 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| B, D [auth E] | PF08771 | FKBP12-rapamycin binding domain (FRB_dom) | FKBP12-rapamycin binding domain | The macrolide antibiotic rapamycin and the cytosol protein FKBP12 can form a complex which specifically inhibits the TORC1 complex, leading to growth arrest. The FKBP12-rapamycin complex interferes with TORC1 function by binding to the FKBP12-rapa ... | Domain |
| A, C [auth D] | PF00254 | FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C) | FKBP-type peptidyl-prolyl cis-trans isomerase | Domain |














