4DKN | pdb_00004dkn

Crystal structure of amphioxus green fluorescent protein, GFPA1

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd4dknb_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches Florida lancelet (Branchiostoma floridae ) [TaxId: 7739 ], SCOPe (2.08)
Ad4dkna_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches Florida lancelet (Branchiostoma floridae ) [TaxId: 7739 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B14-3-3e4dknB1 A: a/b three-layered sandwichesX: SSHS domainH: Class II aaRS and biotin synthetasesT: Ribosome modulation factorF: 14-3-3ECOD (v294.1)
ASH3_1e4dknA1 A: a/b three-layered sandwichesX: all-alpha NTP pyrophosphatasesH: all-alpha NTP pyrophosphatasesT: MazG-relatedF: SH3_1ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)
A2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
AMPHIOXUS GREEN FLUORESCENT PROTEIN, GFPA1- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR011584Green fluorescent protein-relatedFamily
A, B
IPR009017Green fluorescent proteinHomologous Superfamily