4D3E
Tetramer of IpaD, modified from 2J0O, fitted into negative stain electron microscopy reconstruction of the wild type tip complex from the type III secretion system of Shigella flexneri
Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | d4d3ed_ | All alpha proteins | IpaD-like | IpaD-like | automated matches | automated matches | (Shigella flexneri 5a str. M90T ) [TaxId: 1086030 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth D] | SCOP2B Superfamily | IpaD-like | 8042947 | 3001578 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | IpaD | e4d3eD1 | A: alpha bundles | X: IpaD-like (From Topology) | H: IpaD-like (From Topology) | T: IpaD-like | F: IpaD | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth D] | 1.20.1710.10 | Mainly Alpha | Up-down Bundle | IpaD-like | IpaD-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth D] | PF06511 | Type III secretion systems tip complex components (T3SS_TC) | Type III secretion systems tip complex components | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth D] | IPR009483 | Type III secretion systems tip complex component IpaD/BipD/SipD | Family |
A [auth D] | IPR036708 | BipD-like superfamily | Homologous Superfamily |