4AQ9 | pdb_00004aq9

Gating movement in acetylcholine receptor analysed by time- resolved electron cryo-microscopy (open class)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CNeur_chan_LBDe4aq9C5 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: Neur_chan_LBDECOD (1.6)
CNeur_chan_membe4aq9C6 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: Neur_chan_membECOD (1.6)
ENeur_chan_LBDe4aq9E4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: Neur_chan_LBDECOD (1.6)
ENeur_chan_membe4aq9E3 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: Neur_chan_membECOD (1.6)
BNeur_chan_LBDe4aq9B4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: Neur_chan_LBDECOD (1.6)
BNeur_chan_membe4aq9B3 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: Neur_chan_membECOD (1.6)
DNeur_chan_LBDe4aq9D3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: Neur_chan_LBDECOD (1.6)
DNeur_chan_membe4aq9D2 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: Neur_chan_membECOD (1.6)
ANeur_chan_LBDe4aq9A1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Nicotinic receptor ligand binding domain-like (From Topology)T: Nicotinic receptor ligand binding domain-likeF: Neur_chan_LBDECOD (1.6)
ANeur_chan_membe4aq9A2 A: alpha bundlesX: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)H: Neurotransmitter-gated ion-channel transmembrane pore (From Topology)T: Neurotransmitter-gated ion-channel transmembrane poreF: Neur_chan_membECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF02932Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)Neurotransmitter-gated ion-channel transmembrane region- Family
PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domain- Family
PF02932Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)Neurotransmitter-gated ion-channel transmembrane region- Family
PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domain- Family
PF02932Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)Neurotransmitter-gated ion-channel transmembrane region- Family
PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domain- Family
A, D
PF02932Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)Neurotransmitter-gated ion-channel transmembrane region- Family
A, D
PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
ACETYLCHOLINE RECEPTOR DELTA SUBUNIT
ACETYLCHOLINE RECEPTOR GAMMA SUBUNIT
ACETYLCHOLINE RECEPTOR BETA SUBUNIT
A, D
ACETYLCHOLINE RECEPTOR SUBUNIT ALPHA -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
IPR002394Nicotinic acetylcholine receptorFamily
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
IPR006201Neurotransmitter-gated ion-channelFamily
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
IPR002394Nicotinic acetylcholine receptorFamily
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
IPR006201Neurotransmitter-gated ion-channelFamily
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
IPR002394Nicotinic acetylcholine receptorFamily
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
IPR006201Neurotransmitter-gated ion-channelFamily
A, D
IPR002394Nicotinic acetylcholine receptorFamily
A, D
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
A, D
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
A, D
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
A, D
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
A, D
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
A, D
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
A, D
IPR006201Neurotransmitter-gated ion-channelFamily