3POV | pdb_00003pov

Crystal structure of a SOX-DNA complex

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHerpes_alk_exoe3povA1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: Herpes_alk_exoECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.120.860 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Herpesvirus alkaline exonuclease, N-terminal domainCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth D]DNA (5'-D(*GP*GP*TP*CP*GP*AP*CP*TP*AP*GP*GP*AP*GP*GP*AP*TP*CP*CP*C)-3')---
B [auth C]DNA (5'-D(*GP*GP*GP*AP*TP*CP*CP*TP*CP*CP*CP*AP*GP*TP*CP*GP*AP*CP*C)-3')---
ORF 37 - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR011335Restriction endonuclease type II-likeHomologous Superfamily
IPR034720Viral alkaline exonucleaseFamily
IPR001616Alphaherpesvirus alkaline exonucleaseFamily