Crystal structure of a SOX-DNA complex
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Oxidored_FMN | e3povA1 | A: a/b three-layered sandwiches | X: Hormone receptor domain (HRM, Pfam 02793) | H: Hormone receptor domain (HRM, Pfam 02793) | T: Hormone receptor domain (HRM, Pfam 02793) | F: Oxidored_FMN | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.20.120.860 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Herpesvirus alkaline exonuclease, N-terminal domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| ORF 37 | - | - | ||
| B [auth C] | DNA (5'-D(*GP*GP*GP*AP*TP*CP*CP*TP*CP*CP*CP*AP*GP*TP*CP*GP*AP*CP*C)-3') | - | - | - |
| C [auth D] | DNA (5'-D(*GP*GP*TP*CP*GP*AP*CP*TP*AP*GP*GP*AP*GP*GP*AP*TP*CP*CP*C)-3') | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR011335 | Restriction endonuclease type II-like | Homologous Superfamily | |
| IPR034720 | Viral alkaline exonuclease | Family | |
| IPR001616 | Alphaherpesvirus alkaline exonuclease | Family |
