Annotations: 3GZU

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
O	SCOP2B Superfamily	Top domain of rotavirus capsid protein-like	8034587	3002477	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Top domain of rotavirus capsid protein-like	8034587	3002477	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Top domain of rotavirus capsid protein-like	8034587	3002477	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Top domain of rotavirus capsid protein-like	8034587	3002477	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Top domain of rotavirus capsid protein-like	8034587	3002477	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Top domain of rotavirus capsid protein-like	8034587	3002477	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Top domain of rotavirus capsid protein-like	8034587	3002477	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Top domain of rotavirus capsid protein-like	8034587	3002477	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Top domain of rotavirus capsid protein-like	8034587	3002477	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Top domain of rotavirus capsid protein-like	8034587	3002477	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Top domain of rotavirus capsid protein-like	8034587	3002477	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Top domain of rotavirus capsid protein-like	8034587	3002477	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	A virus capsid protein alpha-helical domain	8034584	3001154	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Top domain of rotavirus capsid protein-like	8034587	3002477	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Reovirus inner layer core protein p3	8094215	3001935	SCOP2B (2022-06-29)
A	SCOP2 Family	Rotavirus core (VP2)	8046845	4005324	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Reovirus inner layer core protein p3	8094215	3001935	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
O	Ribosomal_L36	e3gzuO1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)
N	Ribosomal_L36	e3gzuN1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)
M	Ribosomal_L36	e3gzuM1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)
L	Ribosomal_L36	e3gzuL1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)
K	Ribosomal_L36	e3gzuK1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)
J	Ribosomal_L36	e3gzuJ1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)
I	Ribosomal_L36	e3gzuI1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)
H	Ribosomal_L36	e3gzuH1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)
G	Ribosomal_L36	e3gzuG1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)
F	Ribosomal_L36	e3gzuF1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)
E	Ribosomal_L36	e3gzuE1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)
D	Ribosomal_L36	e3gzuD1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)
C	Bcl-2	e3gzuC1	A: a/b three-layered sandwiches	X: Alpha-beta plaits	H: HMA-related	T: HMA, heavy metal-associated domain	F: Bcl-2	ECOD (v294.1)
B	Ribosomal_L36	e3gzuB1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)
A	Ribosomal_L36	e3gzuA1	A: a/b three-layered sandwiches	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: Ribosomal_L36	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
O	1.10.1350.10	Mainly Alpha	Orthogonal Bundle	Viral capsid alpha domain	Viral capsid alpha domain	CATH (4.3.0)
O	2.60.120.170	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
N	1.10.1350.10	Mainly Alpha	Orthogonal Bundle	Viral capsid alpha domain	Viral capsid alpha domain	CATH (4.3.0)
N	2.60.120.170	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
M	1.10.1350.10	Mainly Alpha	Orthogonal Bundle	Viral capsid alpha domain	Viral capsid alpha domain	CATH (4.3.0)
M	2.60.120.170	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
L	1.10.1350.10	Mainly Alpha	Orthogonal Bundle	Viral capsid alpha domain	Viral capsid alpha domain	CATH (4.3.0)
L	2.60.120.170	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
K	1.10.1350.10	Mainly Alpha	Orthogonal Bundle	Viral capsid alpha domain	Viral capsid alpha domain	CATH (4.3.0)
K	2.60.120.170	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
J	1.10.1350.10	Mainly Alpha	Orthogonal Bundle	Viral capsid alpha domain	Viral capsid alpha domain	CATH (4.3.0)
J	2.60.120.170	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
I	1.10.1350.10	Mainly Alpha	Orthogonal Bundle	Viral capsid alpha domain	Viral capsid alpha domain	CATH (4.3.0)
I	2.60.120.170	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
H	1.10.1350.10	Mainly Alpha	Orthogonal Bundle	Viral capsid alpha domain	Viral capsid alpha domain	CATH (4.3.0)
H	2.60.120.170	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
G	1.10.1350.10	Mainly Alpha	Orthogonal Bundle	Viral capsid alpha domain	Viral capsid alpha domain	CATH (4.3.0)
G	2.60.120.170	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
F	1.10.1350.10	Mainly Alpha	Orthogonal Bundle	Viral capsid alpha domain	Viral capsid alpha domain	CATH (4.3.0)
F	2.60.120.170	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
E	1.10.1350.10	Mainly Alpha	Orthogonal Bundle	Viral capsid alpha domain	Viral capsid alpha domain	CATH (4.3.0)
E	2.60.120.170	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
D	1.10.1350.10	Mainly Alpha	Orthogonal Bundle	Viral capsid alpha domain	Viral capsid alpha domain	CATH (4.3.0)
D	2.60.120.170	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
C	1.10.1350.10	Mainly Alpha	Orthogonal Bundle	Viral capsid alpha domain	Viral capsid alpha domain	CATH (4.3.0)
C	2.60.120.170	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, D, E, F, G C, D, E, F, G, H, I, J, K, L, M, N, O	Intermediate capsid protein VP6	structural molecule activity cation binding ion binding binding metal ion binding small molecule binding host cell surface binding host cell surface receptor binding	membrane organization cellular component organization membrane fusion fusion of virus membrane with host plasma membrane viral process cellular process cellular component organization or biogenesis membrane fusion involved in viral entry into host cell	virion component viral membrane viral envelope viral capsid icosahedral viral capsid T=13 icosahedral viral capsid viral intermediate capsid
A, B	Inner capsid protein VP2	RNA binding binding nucleic acid binding	-	viral capsid icosahedral viral capsid virion component viral inner capsid viral nucleocapsid T=2 icosahedral viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, D, E, F, G C, D, E, F, G, H, I, J, K, L, M, N, O	IPR001385	Rotavirus A/C, major capsid protein VP6	Family
C, D, E, F, G C, D, E, F, G, H, I, J, K, L, M, N, O	IPR008935	Virus capsid protein, alpha-helical	Homologous Superfamily
C, D, E, F, G C, D, E, F, G, H, I, J, K, L, M, N, O	IPR008980	Viral capsid/haemagglutinin protein	Homologous Superfamily
A, B	IPR007779	Rotavirus VP2	Family