3CWX | pdb_00003cwx

Crystal structure of cagd from helicobacter pylori pathogenicity island

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyCagD-like 8092205 3002571 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCagD-like 8092205 3002571 SCOP2B (2022-06-29)
ASCOP2 FamilyCagD-like 8045791 4004688 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyCagD-like 8092205 3002571 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CCagDe3cwxC1 A: a+b two layersX: Type III secretory system chaperone-likeH: protein CagD (From Topology)T: protein CagDF: CagDECOD (1.6)
BCagDe3cwxB1 A: a+b two layersX: Type III secretory system chaperone-likeH: protein CagD (From Topology)T: protein CagDF: CagDECOD (1.6)
ACagDe3cwxA1 A: a+b two layersX: Type III secretory system chaperone-likeH: protein CagD (From Topology)T: protein CagDF: CagDECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C3.40.1420.20 Alpha Beta 3-Layer(aba) Sandwich Inhibitor of vertebrate lysozyme, Ivy Pathogenicity island component CagDCATH (4.3.0)
B3.40.1420.20 Alpha Beta 3-Layer(aba) Sandwich Inhibitor of vertebrate lysozyme, Ivy Pathogenicity island component CagDCATH (4.3.0)
A3.40.1420.20 Alpha Beta 3-Layer(aba) Sandwich Inhibitor of vertebrate lysozyme, Ivy Pathogenicity island component CagDCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
protein CagD - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR032336Pathogenicity island component CagDFamily
A, B, C
IPR038229Pathogenicity island component CagD superfamilyHomologous Superfamily