3ZL5 | pdb_00003zl5

Crystal structure of Schistosoma mansoni Peroxiredoxin I C48S mutant with one decamer in the ASU

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
J	d3zl5j_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
I	d3zl5i_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
H	d3zl5h_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
G	d3zl5g_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
F	d3zl5f_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
E	d3zl5e_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
D	d3zl5d_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
C	d3zl5c_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
B	d3zl5b_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
A	d3zl5a_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
J	DNA_gyraseA_C	e3zl5J1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-pinwheel	T: beta-pinwheel	F: DNA_gyraseA_C	ECOD (v294.1)
I	DNA_gyraseA_C	e3zl5I1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-pinwheel	T: beta-pinwheel	F: DNA_gyraseA_C	ECOD (v294.1)
H	DNA_gyraseA_C	e3zl5H1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-pinwheel	T: beta-pinwheel	F: DNA_gyraseA_C	ECOD (v294.1)
G	DNA_gyraseA_C	e3zl5G1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-pinwheel	T: beta-pinwheel	F: DNA_gyraseA_C	ECOD (v294.1)
F	DNA_gyraseA_C	e3zl5F1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-pinwheel	T: beta-pinwheel	F: DNA_gyraseA_C	ECOD (v294.1)
E	DNA_gyraseA_C	e3zl5E1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-pinwheel	T: beta-pinwheel	F: DNA_gyraseA_C	ECOD (v294.1)
D	DNA_gyraseA_C	e3zl5D1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-pinwheel	T: beta-pinwheel	F: DNA_gyraseA_C	ECOD (v294.1)
C	DNA_gyraseA_C	e3zl5C1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-pinwheel	T: beta-pinwheel	F: DNA_gyraseA_C	ECOD (v294.1)
B	DNA_gyraseA_C	e3zl5B1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-pinwheel	T: beta-pinwheel	F: DNA_gyraseA_C	ECOD (v294.1)
A	DNA_gyraseA_C	e3zl5A1	A: a/b three-layered sandwiches	X: beta-propeller-like	H: beta-pinwheel	T: beta-pinwheel	F: DNA_gyraseA_C	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
J	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
I	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
H	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
G	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
F	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
E	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
D	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
C	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
B	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
A	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	PEROXIREDOXIN I	peroxidase activity oxidoreductase activity thioredoxin-dependent peroxiredoxin activity antioxidant activity oxidoreductase activity, acting on peroxide as acceptor thioredoxin peroxidase activity catalytic activity peroxiredoxin activity identical protein binding protein binding binding	cellular response to stimulus cellular response to stress response to stimulus response to stress cellular process catabolic process hydrogen peroxide metabolic process reactive oxygen species metabolic process metabolic process hydrogen peroxide catabolic process cell redox homeostasis cellular homeostasis homeostatic process response to oxidative stress	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR019479	Peroxiredoxin, C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR024706	Peroxiredoxin, AhpC-type	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR050217	Thiol-specific antioxidant peroxiredoxin	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR013766	Thioredoxin domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR000866	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.