3WXX | pdb_00003wxx

Crystal Structure of a T3SS complex from Aeromonas hydrophila

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	SseC-like	8102960	3002768	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	SseC-like	8102960	3002768	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	SseC-like	8102960	3002768	SCOP2B (2022-06-29)
B	SCOP2 Family	SseC-like	8046619	4005195	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	SseC-like	8102960	3002768	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	SseC	e3wxxH1	A: alpha arrays	X: AopB (From Topology)	H: AopB (From Topology)	T: AopB	F: SseC	ECOD (1.6)
F	SseC	e3wxxF1	A: alpha arrays	X: AopB (From Topology)	H: AopB (From Topology)	T: AopB	F: SseC	ECOD (1.6)
D	SseC	e3wxxD1	A: alpha arrays	X: AopB (From Topology)	H: AopB (From Topology)	T: AopB	F: SseC	ECOD (1.6)
B	SseC	e3wxxB1	A: alpha arrays	X: AopB (From Topology)	H: AopB (From Topology)	T: AopB	F: SseC	ECOD (1.6)
G	TPR_3	e3wxxG1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: TPR_3	ECOD (1.6)
E	TPR_3	e3wxxE1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: TPR_3	ECOD (1.6)
C	TPR_3	e3wxxC1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: TPR_3	ECOD (1.6)
A	TPR_3	e3wxxA1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: TPR_3	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
G	1.25.40.10	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Tetratricopeptide repeat domain	CATH (4.3.0)
E	1.25.40.10	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Tetratricopeptide repeat domain	CATH (4.3.0)
C	1.25.40.10	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Tetratricopeptide repeat domain	CATH (4.3.0)
A	1.25.40.10	Mainly Alpha	Alpha Horseshoe	Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat	Tetratricopeptide repeat domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B, D, F, H	PF04888	Secretion system effector C (SseC) like family (SseC)	Secretion system effector C (SseC) like family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, D, F, H	AopB	-	-	host cellular component cellular anatomical structure host cell part host cell membrane other organism part membrane
A, C, E, G	AcrH	cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B, D, F, H	IPR006972	Translocator protein BipB-like, C-terminal domain	Domain
A, C, E, G	IPR005415	Type III secretion system, low calcium response, chaperone LcrH/SycD	Family
A, C, E, G	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
A, C, E, G	IPR016379	Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
B, D, F, H	OPM	Monotopic/peripheral	All alpha monotopic/peripheral	Secretion system effector C	Secretion system effector C

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.