A new conserved neutralizing epitope at the globular head of hemagglutinin in H3N2 influenza viruses


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Z [auth P]PRMT_Ce3wheP1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
Y [auth N]PRMT_Ce3wheN1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
JA [auth 0]Hemagglutinine3whe01 A: alpha arraysX: Cysteine proteinases-likeH: SH3T: SH3F: HemagglutininECOD (v295)
IA [auth 8]PRMT_Ce3whe81 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
HA [auth 6]PRMT_Ce3whe61 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
GA [auth 4]PRMT_Ce3whe41 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
FA [auth 2]PRMT_Ce3whe21 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
EA [auth Z]PRMT_Ce3wheZ1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
DA [auth X]PRMT_Ce3wheX1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
CA [auth V]PRMT_Ce3wheV1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
BA [auth T]PRMT_Ce3wheT1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
AA [auth R]PRMT_Ce3wheR1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
X [auth 9]PRMT_Ce3whe91 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
W [auth 7]PRMT_Ce3whe71 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
V [auth 5]PRMT_Ce3whe51 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
U [auth 3]PRMT_Ce3whe31 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
T [auth 1]PRMT_Ce3whe11 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
S [auth Y]PRMT_Ce3wheY1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
R [auth W]PRMT_Ce3wheW1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
Q [auth U]PRMT_Ce3wheU1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
P [auth S]PRMT_Ce3wheS1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
O [auth Q]PRMT_Ce3wheQ1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
N [auth O]PRMT_Ce3wheO1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
MPRMT_Ce3wheM1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
LPRMT_Ce3wheL1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
KPRMT_Ce3wheK1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
JPRMT_Ce3wheJ1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
IPRMT_Ce3wheI1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
HPRMT_Ce3wheH1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
GPRMT_Ce3wheG1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
FPRMT_Ce3wheF1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
EPRMT_Ce3wheE1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
DPRMT_Ce3wheD1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
CPRMT_Ce3wheC1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
BPRMT_Ce3wheB1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)
APRMT_Ce3wheA1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: PRMT_CECOD (v295)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
F005-126 Fab, anti-anti-influenza hemagglutinin, neutralizing L-LAMBDA Homo sapiens (human) IGLV1-40*01, IGLJ2*01, IGLJ3*02, IGLJ3*01, IGLC2*01, IGLC2*02, IGLC3*04 V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA IG FAB-GAMMA-1_LAMBDA IMGT (202624-0)
F005-126 Fab, anti-anti-influenza hemagglutinin, neutralizing VH-CH1 Homo sapiens (human) IGHV1-18*01, IGHV1-18*04, IGHJ6*01, IGHJ6*02, IGHG1*01, IGHG1*02, IGHG1*04, IGHG1*05 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_LAMBDA IMGT (202624-0)

SAbDab Antibody Annotation SAbDab Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
immunoglobulin light chain---
immunoglobulin heavy chain---
A, B, C, D, E
Hemagglutinin

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR001364Haemagglutinin, influenzavirus A/BFamily
A, B, C, D, E
IPR008980Viral capsid/haemagglutinin proteinHomologous Superfamily
A, B, C, D, E
IPR000149Haemagglutinin, influenzavirus AFamily
A, B, C, D, E
IPR013828Haemagglutinin, HA1 chain, alpha/beta domain superfamilyHomologous Superfamily