3U1W | pdb_00003u1w

Crystal structure of a Calcium binding protein (BDI_1975) from Parabacteroides distasonis ATCC 8503 at 2.00 A resolution

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyBLIP repeat-like 8092100 3000321 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyBLIP repeat-like 8092101 3000321 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyBLIP repeat-like 8092099 3000321 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyBLIP repeat-like 8092102 3000321 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyBLIP repeat-like 8092101 3000321 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyBLIP repeat-like 8092100 3000321 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyBLIP repeat-like 8092099 3000321 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyBLIP repeat-like 8092102 3000321 SCOP2B (2022-06-29)
ASCOP2 FamilyBT0923-like 8092097 4002225 SCOP2 (2022-06-29)
ASCOP2 FamilyBT0923-like 8092098 4002225 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyBLIP repeat-like 8092100 3000321 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyBLIP repeat-like 8092102 3000321 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyBLIP repeat-like 8092099 3000321 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyBLIP repeat-like 8092101 3000321 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CPepSY_like_Ce3u1wC2 A: a+b two layersX: BLIP-likeH: BT0923-like (From Topology)T: BT0923-likeF: PepSY_like_CECOD (1.6)
CPepSY_like_Ne3u1wC1 A: a+b two layersX: BLIP-likeH: BT0923-like (From Topology)T: BT0923-likeF: PepSY_like_NECOD (1.6)
CEUF08447e3u1wC3 A: a+b two layersX: BLIP-likeH: BT0923-like (From Topology)T: BT0923-likeF: EUF08447ECOD (1.6)
BPepSY_like_Ce3u1wB2 A: a+b two layersX: BLIP-likeH: BT0923-like (From Topology)T: BT0923-likeF: PepSY_like_CECOD (1.6)
BPepSY_like_Ne3u1wB1 A: a+b two layersX: BLIP-likeH: BT0923-like (From Topology)T: BT0923-likeF: PepSY_like_NECOD (1.6)
BEUF08447e3u1wB3 A: a+b two layersX: BLIP-likeH: BT0923-like (From Topology)T: BT0923-likeF: EUF08447ECOD (1.6)
APepSY_like_Ce3u1wA2 A: a+b two layersX: BLIP-likeH: BT0923-like (From Topology)T: BT0923-likeF: PepSY_like_CECOD (1.6)
APepSY_like_Ne3u1wA1 A: a+b two layersX: BLIP-likeH: BT0923-like (From Topology)T: BT0923-likeF: PepSY_like_NECOD (1.6)
AEUF08447e3u1wA3 A: a+b two layersX: BLIP-likeH: BT0923-like (From Topology)T: BT0923-likeF: EUF08447ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C3.10.450.360 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
B3.10.450.360 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
A3.10.450.360 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF11396Putative beta-lactamase-inhibitor-like, PepSY-like (PepSY_like)Putative beta-lactamase-inhibitor-like, PepSY-likeThis family of bacterial proteins is probably periplasmic. Members are found predominantly in microbes of the human gut and oral cavity. Structurally, one member of this family is found to show similarity to the beta-lactamase-inhibitor PepSY protein ...This family of bacterial proteins is probably periplasmic. Members are found predominantly in microbes of the human gut and oral cavity. Structurally, one member of this family is found to show similarity to the beta-lactamase-inhibitor PepSY proteins, so the overall function may be inhibitory. There are tandem repeats of the domain on many family members [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Hypothetical PERIPLASMIC PROTEIN - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR021533Putative beta-lactamase-inhibitor-like, PepSY-likeDomain