3U1D | pdb_00003u1d

The structure of a protein with a GntR superfamily winged-helix-turn-helix domain from Halomicrobium mukohataei.

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BWD40, eIF2A, Beta-prop_WDR5e3u1dB1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: WD40, eIF2A, Beta-prop_WDR5ECOD (v294.1)
AH2THe3u1dA1 A: a/b three-layered sandwichesX: Baculovirus p35 protein-relatedH: RIFT-relatedT: Phage tail proteinsF: H2THECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.10.10.10 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domainCATH (4.3.0)
A1.10.10.10 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF12840Helix-turn-helix domain (HTH_20)Helix-turn-helix domainThis domain represents a DNA-binding Helix-turn-helix domain found in transcriptional regulatory proteins. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
A, B
IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily